RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 LRPAP1P30533 357 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 CASP14P31944 242 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 KRT9P35527 623 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 DEKP35659 375 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 KLK7P49862 253 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 MFAP3P55082 362 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 POLR2FP61218 127 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 NOP14P78316 857 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 MYO1EQ12965 1108 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 ZNF699Q32M78 642 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 GLRA4Q5JXX5 417 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 CCDC186Q7Z3E2 898 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 C7orf61Q8IZ16 206 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 CCDC112Q8NEF3 446 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 LPPQ93052 612 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 TRIM44Q96DX7 344 aaPredicted RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 UROC1Q96N76 676 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 PANX2Q96RD6 677 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 GAD1Q99259 594 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 ZNHIT6Q9NWK9 470 aaKnown RBP11.17□□□□□ -0.62
RFC1-211ENST00000509084 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 FHOD1Q9Y613 1164 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 MICAL3Q7RTP6 2002 aa11.17□□□□□ -0.62
RFC1-211ENST00000509084 OFD1O75665 1012 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 NOL4O94818 638 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 AMHP03971 560 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 CSF2RAP15509 400 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 RPL9P32969 192 aaKnown RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
RFC1-211ENST00000509084 SCNN1GP51170 649 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 FPGSQ05932 587 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 TUSC3Q13454 348 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 ZNF667Q5HYK9 610 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 NOMO2Q5JPE7 1267 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 PSRC1Q6PGN9 363 aaPredicted RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 PPM1KQ8N3J5 372 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 OR8K1Q8NGG5 319 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
RFC1-211ENST00000509084 STK33Q9BYT3 514 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 NIF3L1Q9GZT8 377 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 ABHD10Q9NUJ1 306 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 TUBGCP4Q9UGJ1 667 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 SIX4Q9UIU6 781 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 DNAJC12Q9UKB3 198 aa11.16□□□□□ -0.62
RFC1-211ENST00000509084 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 ANO9A1A5B4 782 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 CARNS1A5YM72 827 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 MEIS3P2A8K0S8 358 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 EPHB6O15197 1021 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 CST3P01034 146 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 IBSPP21815 317 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 ITGB8P26012 769 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 STAT1P42224 750 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 KCNJ6P48051 423 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 MYL6P60660 151 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 TNNC1P63316 161 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 SV2CQ496J9 727 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 HS1BP3Q53T59 392 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 IQCEQ6IPM2 695 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 PHLDB3Q6NSJ2 640 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 DPY19L2P1Q6NXN4 242 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 PDXDC1Q6P996 788 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 TC2NQ8N9U0 490 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 GSTCDQ8NEC7 633 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 BAP1Q92560 729 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 C18orf25Q96B23 403 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 MTIF3Q9H2K0 278 aaKnown RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 UBE2TQ9NPD8 197 aaPredicted RBP11.15□□□□□ -0.62
RFC1-211ENST00000509084 NLRC4Q9NPP4 1024 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 PLAGL2Q9UPG8 496 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 AGAP1Q9UPQ3 857 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.62
RFC1-211ENST00000509084 TDRD15B5MCY1 1934 aaKnown RBP11.14□□□□□ -0.63
RFC1-211ENST00000509084 ARHGEF37A1IGU5 675 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 LRRC53A6NM62 1247 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 F8VZ95 297 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 PIRO00625 290 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 POMCP01189 267 aa11.14□□□□□ -0.63
RFC1-211ENST00000509084 FGBP02675 491 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms