RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 M0QZQ0 153 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 TNFRSF10AO00220 468 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 TBX10O75333 385 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 NR3C1P04150 777 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 URODP06132 367 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 CNPP09543 421 aaKnown RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 CYP2J2P51589 502 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 KCNQ1P51787 676 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 CLDN10P78369 228 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 RBM10P98175 930 aaKnown RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 PSMD6Q15008 389 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 RBM23Q86U06 439 aaKnown RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 C1orf127Q8N9H9 656 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 BEST2Q8NFU1 509 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 LNX1Q8TBB1 728 aaPredicted RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 GPT2Q8TD30 523 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 SLC22A17Q8WUG5 538 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 MSLNLQ96KJ4 702 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 UHRF1Q96T88 793 aaPredicted RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 TTPALQ9BTX7 342 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 CLSTN2Q9H4D0 955 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 TLE6Q9H808 572 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 MRPL17Q9NRX2 175 aaKnown RBP17.73■□□□□ 0.43
DDR1-261ENST00000507901 FNIP2Q9P278 1114 aa17.73■□□□□ 0.43
DDR1-261ENST00000507901 VCANP13611 3396 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 FSD2A1L4K1 749 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 I3L4J1 428 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 MAPK13O15264 365 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 SPTLC1O15269 473 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 TBC1D4O60343 1298 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 C1RP00736 705 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
DDR1-261ENST00000507901 MRPL58Q14197 206 aaKnown RBP17.72■□□□□ 0.43
DDR1-261ENST00000507901 EDRF1Q3B7T1 1238 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 FAM171A1Q5VUB5 890 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 OR5B17Q8NGF7 314 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 DPP3Q9NY33 737 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 KIAA1468Q9P260 1216 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 SSX2IPQ9Y2D8 614 aa17.72■□□□□ 0.43
DDR1-261ENST00000507901 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 SYN3O14994 580 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 TEX28O15482 410 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 CALUO43852 315 aaPredicted RBP17.71■□□□□ 0.43
DDR1-261ENST00000507901 EXOC3O60645 756 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 TKTP29401 623 aaKnown RBP17.71■□□□□ 0.43
DDR1-261ENST00000507901 CASP4P49662 377 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 CLCN4P51793 760 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 PMS1P54277 932 aaKnown RBP17.71■□□□□ 0.43
DDR1-261ENST00000507901 LILRA4P59901 499 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 BMS1Q14692 1282 aaKnown RBP17.71■□□□□ 0.43
DDR1-261ENST00000507901 SURF1Q15526 300 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 WDR49Q8IV35 697 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 IGFLR1Q9H665 355 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDR1-261ENST00000507901 HCFC2Q9Y5Z7 792 aa17.71■□□□□ 0.43
DDR1-261ENST00000507901 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 AKAP3O75969 853 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 PAPLNO95428 1278 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 PAX3P23760 479 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 CAMK4Q16566 473 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 LEXMQ3ZCV2 418 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 C1orf220Q5T0J3 134 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 FOXR2Q6PJQ5 311 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 PRSS55Q6UWB4 352 aaPredicted RBP17.7■□□□□ 0.42
DDR1-261ENST00000507901 TRIML1Q8N9V2 468 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 RDH13Q8NBN7 331 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 RIN2Q8WYP3 895 aaPredicted RBP17.7■□□□□ 0.42
DDR1-261ENST00000507901 ZNF516Q92618 1163 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 CGRRF1Q99675 332 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 CLSTN3Q9BQT9 956 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 CLDND1Q9NY35 253 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 MTRRQ9UBK8 725 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 PCDHB8Q9UN66 801 aa17.7■□□□□ 0.42
DDR1-261ENST00000507901 C2CD2LO14523 706 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 ADAM12O43184 909 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 NR2F2P24468 414 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 TFAMQ00059 246 aaKnown RBP17.69■□□□□ 0.42
DDR1-261ENST00000507901 ENPEPQ07075 957 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
DDR1-261ENST00000507901 LILRA6Q6PI73 481 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 RSPO2Q6UXX9 243 aaPredicted RBP17.69■□□□□ 0.42
DDR1-261ENST00000507901 CACTINQ8WUQ7 758 aaKnown RBP17.69■□□□□ 0.42
DDR1-261ENST00000507901 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
DDR1-261ENST00000507901 EMILIN2Q9BXX0 1053 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 BACE2Q9Y5Z0 518 aa17.69■□□□□ 0.42
DDR1-261ENST00000507901 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
DDR1-261ENST00000507901 CYP11A1P05108 521 aa17.68■□□□□ 0.42
DDR1-261ENST00000507901 EPCAMP16422 314 aa17.68■□□□□ 0.42
DDR1-261ENST00000507901 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
DDR1-261ENST00000507901 KCNA5P22460 613 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms