RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 UBXN2BQ14CS0 331 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 LONRF1Q17RB8 773 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 ATXN7L2Q5T6C5 722 aaPredicted RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 METRNLQ641Q3 311 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 MFSD5Q6N075 450 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 Q6ZSN1 163 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 ZNF365Q70YC5 407 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 FAM83AQ86UY5 434 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 SESTD1Q86VW0 696 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 ZFPM1Q8IX07 1006 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 DNERQ8NFT8 737 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 BRIX1Q8TDN6 353 aaKnown RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 MAML1Q92585 1016 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 TFAP2CQ92754 450 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 TNPO1Q92973 898 aaKnown RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 GJA10Q969M2 543 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 RBM15Q96T37 977 aaKnown RBP eCLIP4.32□□□□□ -1.72
LSM6-205ENST00000507449 TBCBQ99426 244 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 NEU1Q99519 415 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 ELAC2Q9BQ52 826 aaKnown RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 CPPED1Q9BRF8 314 aaPredicted RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 TRIM54Q9BYV2 358 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 BTBD1Q9H0C5 482 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 NUP62CLQ9H1M0 184 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 GSTO2Q9H4Y5 243 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 SARS2Q9NP81 518 aaKnown RBP4.32□□□□□ -1.72
LSM6-205ENST00000507449 SLAMF7Q9NQ25 335 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 JKAMPQ9P055 326 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 CPNE7Q9UBL6 633 aa4.32□□□□□ -1.72
LSM6-205ENST00000507449 A0A0G2JLL6 359 aaPredicted RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 CDHR4A6H8M9 788 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 F8W8V4 182 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MGEA5O60502 916 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 HAUS5O94927 633 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 GJB1P08034 283 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 IFIT2P09913 472 aaKnown RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 HK1P19367 917 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 EN2P19622 333 aaPredicted RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 SLC7A1P30825 629 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 HTR3AP46098 478 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CASP5P51878 434 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 RABGGTBP53611 331 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 FMO1Q01740 532 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 SLFN5Q08AF3 891 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CNGA2Q16280 664 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 UBXN11Q5T124 520 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 C11orf96Q7Z7L8 435 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MORC1Q86VD1 984 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CIR1Q86X95 450 aaPredicted RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 SPICE1Q8N0Z3 855 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 D2HGDHQ8N465 521 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MB21D1Q8N884 522 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 TMIEQ8NEW7 156 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CXorf38Q8TB03 319 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 PHKBQ93100 1093 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 WWC2-AS2Q96NR7 200 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MPHOSPH9Q99550 1183 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 PACSIN1Q9BY11 444 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 DPH1Q9BZG8 443 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MRPS18AQ9NVS2 196 aaKnown RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 VSX1Q9NZR4 365 aaPredicted RBP4.31□□□□□ -1.72
LSM6-205ENST00000507449 TAGLN3Q9UI15 199 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 ZDHHC8Q9ULC8 765 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 MED16Q9Y2X0 877 aa4.31□□□□□ -1.72
LSM6-205ENST00000507449 CCDC78A2IDD5 438 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 KLRG2A4D1S0 409 aaPredicted RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 DRGXA6NNA5 263 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 PRR5-ARHGAP8B1AHC4 643 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 E9PLN8 166 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 KPNA5O15131 536 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 DNAJB5O75953 348 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 ABHD16AO95870 558 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 POMCP01189 267 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 RARBP10826 455 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 AK2P54819 239 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 SUMO3P55854 103 aaPredicted RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 NOMO3P69849 1222 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 ZNF543Q08ER8 600 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 ICAM4Q14773 271 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 BRD3Q15059 726 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 VPS72Q15906 364 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 ATP2B3Q16720 1220 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 DRICH1Q6PGQ1 229 aaPredicted RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 MAMDC4Q6UXC1 1216 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 HTR3DQ70Z44 454 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 POLNQ7Z5Q5 900 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 SRLQ86TD4 932 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 ZNF808Q8N4W9 903 aaPredicted RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
LSM6-205ENST00000507449 OR10H5Q8NGA6 315 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 Q8TCH9 128 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 KBTBD7Q8WVZ9 684 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 KLHL32Q96NJ5 620 aa4.3□□□□□ -1.72
LSM6-205ENST00000507449 VKORC1Q9BQB6 163 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms