RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TNFSF9P41273 254 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 LIG4P49917 911 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 PFKPQ01813 784 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 PRKCQQ04759 706 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 SLC44A4Q53GD3 710 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 PRSS36Q5K4E3 855 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 POTEHQ6S545 545 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 HAUS6Q7Z4H7 955 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 APPL2Q8NEU8 664 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 LRRC15Q8TF66 581 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 AK8Q96MA6 479 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 PLA2G2FQ9BZM2 168 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 GDE1Q9NZC3 331 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 ODF2LQ9ULJ1 636 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 R4GN57 208 aa12.58□□□□□ -0.4
HMGCS1-204ENST00000507293 CACNA1IQ9P0X4 2223 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 K7ENM7 598 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 SLC26A4O43511 780 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 FAM13AO94988 1023 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 CLTAP09496 248 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 SP9P0CG40 484 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 CPB1P15086 417 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 MARCKSP29966 332 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 LRPAP1P30533 357 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 UBA7P41226 1012 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 GRIN1Q05586 938 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 ADCY1Q08828 1119 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 TWF1Q12792 350 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 UBXN2BQ14CS0 331 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 ZBTB41Q5SVQ8 909 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 TANGO2Q6ICL3 276 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 C1orf210Q8IVY1 113 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 KCNG4Q8TDN1 519 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 KCNN1Q92952 543 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 BLOC1S4Q9NUP1 217 aa12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 UBQLN1Q9UMX0 589 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 MTF2Q9Y483 593 aaPredicted RBP12.57□□□□□ -0.4
HMGCS1-204ENST00000507293 LACTBL1A8MY62 500 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 M0QZQ0 153 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ZNF197O14709 1029 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 FAM189A1O60320 539 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 PIGRP01833 764 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 PLCG1P19174 1290 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 CD72P21854 359 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 FCARP24071 287 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 CCR2P41597 374 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 MCM2P49736 904 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 GUCY2FP51841 1108 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 YWHAHQ04917 246 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 GRM2Q14416 872 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 MCM6Q14566 821 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 LARP1BQ659C4 914 aaKnown RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 PDZD4Q76G19 769 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ELMOD1Q8N336 334 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ELSPBP1Q96BH3 223 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 BCO2Q9BYV7 579 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 LTB4R2Q9NPC1 389 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 SPATA6Q9NWH7 488 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 CEP72Q9P209 647 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 TIMM13Q9Y5L4 95 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 NUP210Q8TEM1 1887 aaPredicted RBP12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 USP34Q70CQ2 3546 aa12.56□□□□□ -0.4
HMGCS1-204ENST00000507293 SCN1AP35498 2009 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 FAM170BA6NMN3 283 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 OGTO15294 1046 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 TBCAO75347 108 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 BMP15O95972 392 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 LMNAP02545 664 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 KRT18P05783 430 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 OR4Q2P0C623 313 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 MYL4P12829 197 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 GJA1P17302 382 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 CYP3A5P20815 502 aa12.55□□□□□ -0.4
HMGCS1-204ENST00000507293 LONP1P36776 959 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms