RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 PRG3Q9Y2Y8 225 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SIT1Q9Y3P8 196 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ZFP37Q9Y6Q3 630 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ZNF292O60281 2723 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 VPS13AQ96RL7 3174 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 UBE4BO95155 1302 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ITIH6Q6UXX5 1313 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 RFPL2O75678 378 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
CPNE4-206ENST00000505957 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ITGA4P13612 1032 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 IDEP14735 1019 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
CPNE4-206ENST00000505957 PBX1P40424 430 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 OR1G1P47890 313 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ZNF131P52739 623 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 NPEPPSP55786 919 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 STX17P56962 302 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 CYP4A11Q02928 519 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 PUM1Q14671 1186 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPNE4-206ENST00000505957 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ZCWPW2Q504Y3 356 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 TCP11X2Q5H9J9 407 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 PLA2G4FQ68DD2 849 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 C1orf186Q6ZWK4 172 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 DGLUCYQ7Z3D6 616 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
CPNE4-206ENST00000505957 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 GPR152Q8TDT2 470 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 CEP170P1Q96L14 293 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 DUSP9Q99956 384 aaKnown RBP11.69□□□□□ -0.54
CPNE4-206ENST00000505957 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 BHMT2Q9H2M3 363 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ARHGEF3Q9NR81 526 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 IPPQ9Y573 584 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 R4GN57 208 aa11.69□□□□□ -0.54
CPNE4-206ENST00000505957 ARL5CA6NH57 179 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 TGM5O43548 720 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 SP9P0CG40 484 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 STARD6P59095 220 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 CREMQ03060 361 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 HTR4Q13639 388 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 CTTNQ14247 550 aaKnown RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 USP41Q3LFD5 358 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 NOTUMQ6P988 496 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 EPM2AIP1Q7L775 607 aaPredicted RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 TPH2Q8IWU9 490 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 KIAA2013Q8IYS2 634 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 RNF149Q8NC42 400 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 RIN2Q8WYP3 895 aaPredicted RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 RUBCNQ92622 972 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 SHDQ96IW2 340 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 NAP1L5Q96NT1 182 aaPredicted RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 GAD1Q99259 594 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 RUSC1Q9BVN2 902 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 COLEC11Q9BWP8 271 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 PIDD1Q9HB75 910 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
CPNE4-206ENST00000505957 ANKEF1Q9NU02 776 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 GIT1Q9Y2X7 761 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 C2orf16Q68DN1 1984 aa11.68□□□□□ -0.54
CPNE4-206ENST00000505957 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 KCNJ18B7U540 433 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 ERLIN2O94905 339 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 KRT18P05783 430 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 DCNP07585 359 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 CLCN1P35523 988 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 MLH1P40692 756 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 PTENP60484 403 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 KCNJ12Q14500 433 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
CPNE4-206ENST00000505957 KRT31Q15323 416 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 NFIL3Q16649 462 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 EDRF1Q3B7T1 1238 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
CPNE4-206ENST00000505957 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms