RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GRM2Q14416 872 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 ATF7IP2Q5U623 682 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 KRT79Q5XKE5 535 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 EEF1DP3Q658K8 133 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 LONP2Q86WA8 852 aa17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 AVENQ9NQS1 362 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-213ENST00000505074 PP2D1A8MPX8 630 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 K7ERI5 159 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 PTPN2P17706 415 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 U2AF2P26368 475 aaKnown RBP eCLIP17.56■□□□□ 0.42e-9■■■□□ 16.8
PDLIM7-213ENST00000505074 PEX3P56589 373 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 SRSF5Q13243 272 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 C8orf34Q49A92 452 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 GLRA4Q5JXX5 417 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 CEP68Q76N32 757 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 SPEM1Q8N4L4 309 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 C4orf32Q8N8J7 132 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 KIF2CQ99661 725 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 ZNF334Q9HCZ1 680 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 TRPV5Q9NQA5 729 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 PIAS3Q9Y6X2 628 aa17.56■□□□□ 0.4
PDLIM7-213ENST00000505074 E9PMD0 336 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 CHRNB1P11230 501 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 CEBPBP17676 345 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 FCARP24071 287 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 TOB1P50616 345 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 DMP1Q13316 513 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 PDIA5Q14554 519 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 DTHD1Q6ZMT9 781 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 FAM160A2Q8N612 972 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 IGSF22Q8N9C0 903 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
PDLIM7-213ENST00000505074 PHLPP2Q6ZVD8 1323 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 H3BQV1 296 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 LAD1O00515 517 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 TM4SF5O14894 197 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 HIP1RO75146 1068 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 LRG1P02750 347 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 CDC25AP30304 524 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 GDI1P31150 447 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 YARSP54577 528 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 OSTNP61366 133 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 RABEP1Q15276 862 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 ZNF568Q3ZCX4 644 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 FAM78AQ5JUQ0 283 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 POTEHQ6S545 545 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 MAP4K3Q8IVH8 894 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 KMT5AQ9NQR1 393 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 CDY1Q9Y6F8 540 aa17.54■□□□□ 0.4
PDLIM7-213ENST00000505074 SPAG17Q6Q759 2223 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 ZNF197O14709 1029 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 HARSP12081 509 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 HOXB3P14651 431 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 PSMC3P17980 439 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 CCNE1P24864 410 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 NPTX2P47972 431 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 LRRC32Q14392 662 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 GAS6Q14393 721 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 HEATR6Q6AI08 1181 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 TCHPQ9BT92 498 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 MRPL4Q9BYD3 311 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 ZMIZ1Q9ULJ6 1067 aa17.53■□□□□ 0.4
PDLIM7-213ENST00000505074 MYH11P35749 1972 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 AXIN1O15169 862 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 B3GAT3O94766 335 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 MICAL2O94851 1124 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 PAPSS2O95340 614 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 FGFR3P22607 806 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 ELF1P32519 619 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 RAD51AP2Q09MP3 1159 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 SF3A2Q15428 464 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 PRSS36Q5K4E3 855 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 VITQ6UXI7 678 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 ASB16Q96NS5 453 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 CORO1BQ9BR76 489 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 RUSC1Q9BVN2 902 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 GOLGA2P5Q9HBQ8 144 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.4
PDLIM7-213ENST00000505074 ARHGEF37A1IGU5 675 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 K7ESF4 209 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 ZNF263O14978 683 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 PRPHP41219 470 aa17.51■□□□□ 0.39
PDLIM7-213ENST00000505074 CLCNKBP51801 687 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms