RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RTL10Q7L3V2 364 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZBTB33Q86T24 672 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 TMEM173Q86WV6 379 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 SEMA4DQ92854 862 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 CNOT6LQ96LI5 555 aaKnown RBP8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 HCSTQ9UBK5 93 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.97
CDC42SE2-208ENST00000505065 A0A1W2PQC6 194 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SYN3O14994 580 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 FECHP22830 423 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 PBX2P40425 430 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 FMO5P49326 533 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 MAN2A1Q16706 1144 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SASS6Q6UVJ0 657 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 CSGALNACT2Q8N6G5 542 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 TOP6BLQ8N6T0 577 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 PAAF1Q9BRP4 392 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SYT11Q9BT88 431 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 GANQ9H2C0 597 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SAMSN1Q9NSI8 373 aaKnown RBP8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 BACE2Q9Y5Z0 518 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 NRP1O14786 923 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 AP5Z1O43299 807 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 KIF4AO95239 1232 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 PNPLA4P41247 253 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SV2AQ7L0J3 742 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 TRAPPC11Q7Z392 1133 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 SPPL3Q8TCT6 385 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 URGCPQ8TCY9 931 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 APOBEC3GQ9HC16 384 aaKnown RBP8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
CDC42SE2-208ENST00000505065 LGALS16A8MUM7 142 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 KCNJ6P48051 423 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 KRT31Q15323 416 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 SEZ6Q53EL9 994 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 TMCO2Q7Z6W1 182 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 FAM114A1Q8IWE2 563 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 SRRTQ9BXP5 876 aaKnown RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PCIF1Q9H4Z3 704 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 DPP3Q9NY33 737 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 NCANO14594 1321 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PPEF2O14830 753 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 N4BP1O75113 896 aaKnown RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 CST3P01034 146 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 CLCNKBP51801 687 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 LILRA4P59901 499 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 VWA3BQ502W6 1294 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 SYCP3Q8IZU3 236 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 TMEM130Q8N3G9 435 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 SLC22A17Q8WUG5 538 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 HDAC7Q8WUI4 952 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 NENFQ9UMX5 172 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 FRMD4BQ9Y2L6 1034 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 NFE2L3Q9Y4A8 694 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 KCNJ18B7U540 433 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 ITGB1P05556 798 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 EPB41P11171 864 aaKnown RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PPM1AP35813 382 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 YARSP54577 528 aaKnown RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 KCNJ12Q14500 433 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 DUOXA2Q1HG44 320 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 KCNT2Q6UVM3 1135 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 CHRDL2Q6WN34 429 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 WHAMMQ8TF30 809 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PIK3R5Q8WYR1 880 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 FANCLQ9NW38 375 aa8.95□□□□□ -0.98
CDC42SE2-208ENST00000505065 PODXLO00592 558 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SOD2P04179 222 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 RFX1P22670 979 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 GCNT1Q02742 428 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 TBX2Q13207 712 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 FAM171BQ6P995 826 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 CACTINQ8WUQ7 758 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 BICD1Q96G01 975 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 CEP295NLQ96MC4 621 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SCLT1Q96NL6 688 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 TGS1Q96RS0 853 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 NAT10Q9H0A0 1025 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 ZHX3Q9H4I2 956 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 NYNRINQ9P2P1 1898 aaKnown RBP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SMTNL1A8MU46 457 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 MYOGP15173 224 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 CYP2J2P51589 502 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 UVSSAQ2YD98 709 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 KRT39Q6A163 491 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SLC8B1Q6J4K2 584 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 THNSL1Q8IYQ7 743 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 MTMR12Q9C0I1 747 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 MTRRQ9UBK8 725 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 GOLGA8IPA6NC78 632 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 GOLGA8JA6NMD2 632 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 EXOC3O60645 756 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 CTSAP10619 480 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 DNAJB2P25686 324 aa8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 FXR1P51114 621 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42SE2-208ENST00000505065 SPAG1Q07617 926 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 385.5 ms