RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 DNAJC12Q9UKB3 198 aa12.22□□□□□ -0.45
TRIO-206ENST00000504606 AJAP1Q9UKB5 411 aaPredicted RBP12.22□□□□□ -0.45
TRIO-206ENST00000504606 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
TRIO-206ENST00000504606 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
TRIO-206ENST00000504606 RNF225M0QZC1 329 aaPredicted RBP12.21□□□□□ -0.45
TRIO-206ENST00000504606 PPEF2O14830 753 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 INPPL1O15357 1258 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 HOXA2O43364 376 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 BAIAP3O94812 1187 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 UPP2O95045 317 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 FGBP02675 491 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 AMHP03971 560 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 RFX1P22670 979 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 ATICP31939 592 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 KRT9P35527 623 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 GATMP50440 423 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 RAPGEF1Q13905 1077 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 NAB2Q15742 525 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 NOMO2Q5JPE7 1267 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 C9orf57Q5W0N0 161 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 RRAGAQ7L523 313 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 OTOP2Q7RTS6 562 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 CNGA4Q8IV77 575 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.45
TRIO-206ENST00000504606 CXorf38Q8TB03 319 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 TAF4BQ92750 862 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 SPAG5Q96R06 1193 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 LBHD1Q9BQE6 289 aaPredicted RBP12.21□□□□□ -0.45
TRIO-206ENST00000504606 APOBEC3GQ9HC16 384 aaKnown RBP12.21□□□□□ -0.45
TRIO-206ENST00000504606 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 DAAM1Q9Y4D1 1078 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.45
TRIO-206ENST00000504606 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
TRIO-206ENST00000504606 TTC3P53804 2025 aa12.21□□□□□ -0.46
TRIO-206ENST00000504606 ANO9A1A5B4 782 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 LRRC53A6NM62 1247 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 PIRO00625 290 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 LRPAP1P30533 357 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 KCNJ6P48051 423 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 MFAP3P55082 362 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
TRIO-206ENST00000504606 DEFB103AP81534 67 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 ZBED6P86452 979 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 TUSC3Q13454 348 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 DRAP1Q14919 205 aaPredicted RBP12.2□□□□□ -0.46
TRIO-206ENST00000504606 ZNF667Q5HYK9 610 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
TRIO-206ENST00000504606 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 C16orf59Q7L2K0 433 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 LRRC52Q8N7C0 313 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 TC2NQ8N9U0 490 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 BAP1Q92560 729 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 KAT5Q92993 513 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 FAM81BQ96LP2 452 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 NAA15Q9BXJ9 866 aaKnown RBP12.2□□□□□ -0.46
TRIO-206ENST00000504606 XYLT2Q9H1B5 865 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
TRIO-206ENST00000504606 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
TRIO-206ENST00000504606 TBKBP1A7MCY6 615 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 PODXLO00592 558 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 PNPLA4P41247 253 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 TAF6P49848 677 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 CLCNKBP51801 687 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 EPHB4P54760 987 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 GCNT1Q02742 428 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 RNASELQ05823 741 aaKnown RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 CUL2Q13617 745 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 WDR72Q3MJ13 1102 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 OR8K1Q8NGG5 319 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 KREMEN1Q96MU8 473 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.19□□□□□ -0.461e-8■□□□□ 10.3
TRIO-206ENST00000504606 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
TRIO-206ENST00000504606 STK33Q9BYT3 514 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 NIF3L1Q9GZT8 377 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 ABHD10Q9NUJ1 306 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 POLIQ9UNA4 740 aa12.19□□□□□ -0.46
TRIO-206ENST00000504606 F8VZ95 297 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 DDHD2O94830 711 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 P4HA1P13674 534 aa12.18□□□□□ -0.46
TRIO-206ENST00000504606 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
TRIO-206ENST00000504606 STAT1P42224 750 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms