RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MMP13P45452 471 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 TFF2Q03403 129 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 SP140Q13342 867 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 TRIM25Q14258 630 aaKnown RBP2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 PCBP1Q15365 356 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 SF3B3Q15393 1217 aaKnown RBP2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 PITRM1Q5JRX3 1037 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 PXDC1Q5TGL8 231 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 FKBP9P1Q75LS8 142 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 AMIGO2Q86SJ2 522 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 SLC41A1Q8IVJ1 513 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 ACRBPQ8NEB7 543 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 APPBP2Q92624 585 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 FBXL20Q96IG2 436 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 MARK4Q96L34 752 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 HAPLN3Q96S86 360 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 PNKPQ96T60 521 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 KCTD10Q9H3F6 313 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 LPLP06858 475 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 CANXP27824 592 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 ADCYAP1R1P41586 468 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 LGALS4P56470 323 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 UBXN2BQ14CS0 331 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 TWIST1Q15672 202 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 SEPT7Q16181 437 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 CCDC144BQ3MJ40 725 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 BROXQ5VW32 411 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 FAM180AQ6UWF9 173 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZNF782Q6ZMW2 699 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 YTHDF3Q7Z739 585 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 RASSF3Q86WH2 238 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 DHX37Q8IY37 1157 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 NSMCE1Q8WV22 266 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 SLC5A5Q92911 643 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 RNPC3Q96LT9 517 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 TARS2Q9BW92 718 aaKnown RBP2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 EMC7Q9NPA0 242 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 INTS13Q9NVM9 706 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 MOCS1Q9NZB8 636 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 PNPLA7Q6ZV29 1317 aa2.91□□□□□ -1.94
HMGB3P17-201ENST00000504195 AATKQ6ZMQ8 1374 aa2.9□□□□□ -1.94
HMGB3P17-201ENST00000504195 PPP6CO00743 305 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADCY6O43306 1168 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 AKR1B10O60218 316 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 GAS8-AS1O95177 125 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 TOP3BO95985 862 aaKnown RBP2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 SREBF1P36956 1147 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 RAP2BP61225 183 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 FSCN1Q16658 493 aaKnown RBP2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 UGT8Q16880 541 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 MST1LQ2TV78 715 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 TKFCQ3LXA3 575 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 ATP13A4Q4VNC1 1196 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 CT83Q5H943 113 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 SLC18B1Q6NT16 456 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 FBXO18Q8NFZ0 1043 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 OR7D4Q8NG98 312 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 NUP133Q8WUM0 1156 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 TMEM255BQ8WV15 326 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 TFAP2BQ92481 460 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 EAF2Q96CJ1 260 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 RAX2Q96IS3 184 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 UHRF1Q96T88 793 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 FEZ1Q99689 392 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRDM12Q9H4Q4 367 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 BCO1Q9HAY6 547 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 FANCLQ9NW38 375 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 PLAAQ9Y263 795 aa2.9□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRSS44E7EML9 344 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 CDC45O75419 566 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 TUBB4AP04350 444 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 IL2RBP14784 551 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ALOX15P16050 662 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ATP5JP18859 108 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ECHS1P30084 290 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 GEN1Q17RS7 908 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 FBXL22Q6P050 247 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 TRMT2AQ8IZ69 625 aaKnown RBP2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 REPS2Q8NFH8 660 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 LEO1Q8WVC0 666 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 RIN2Q8WYP3 895 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 USP7Q93009 1102 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 MFSD3Q96ES6 412 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ACAP3Q96P50 834 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 MRI1Q9BV20 369 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 VPS16Q9H269 839 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 USP25Q9UHP3 1055 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADAM21Q9UKJ8 722 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 NEU2Q9Y3R4 380 aa2.89□□□□□ -1.95
HMGB3P17-201ENST00000504195 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 TARM1B6A8C7 271 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 TTLL1O95922 423 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 RAP2AP10114 183 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 ALAS1P13196 640 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 SCP2P22307 547 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 ENPP1P22413 925 aa2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 ADSLP30566 484 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P17-201ENST00000504195 PER3P56645 1201 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms