RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MSTO1Q9BUK6 570 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 VPS11Q9H270 941 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM205AQ6ZU69 1335 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 MYO3BQ8WXR4 1341 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 OPLAHO14841 1288 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 CMTM5Q96DZ9 223 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 AFG3L2Q9Y4W6 797 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 TCRBV5S4A2TA0A5A2 114 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 PTK7Q13308 1070 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 NT5DC3Q86UY8 548 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 INPP5DQ92835 1189 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM213AQ9BRX8 229 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 LXNQ9BS40 222 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 K7ERI5 159 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 AGPSO00116 658 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 JAK3P52333 1124 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 NFIXQ14938 502 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 KAT2BQ92831 832 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 GTPBP10A4D1E9 387 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 PI4K2BG5E9Z4 385 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 ATP4AP20648 1035 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 SLC34A1Q06495 639 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 LACTB2Q53H82 288 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 PRPF39Q86UA1 669 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 MTDHQ86UE4 582 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 MCPH1Q8NEM0 835 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 ATP8B4Q8TF62 1192 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 THAP11Q96EK4 314 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM192AQ9GZU8 254 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 CCDC134Q9H6E4 229 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 MTMR4Q9NYA4 1195 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 DENND3A2RUS2 1198 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 RIPK1Q13546 671 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 CYTH1Q15438 398 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 C11orf63Q6NUN7 778 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 HSPBP1Q9NZL4 362 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 ATMINO43313 823 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 PRCCQ92733 491 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 ADPGKQ9BRR6 497 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 TBC1D23Q9NUY8 699 aa18.12■□□□□ 0.49
HMGXB3-201ENST00000502717 RNF225M0QZC1 329 aaPredicted RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 NTSR2O95665 410 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 CPA2P48052 419 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 ABI1Q8IZP0 508 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 NAALADL1Q9UQQ1 740 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 RASA1P20936 1047 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 QARSP47897 775 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 OVGP1Q12889 678 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 RAB44Q7Z6P3 723 aaPredicted RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 B4GALNT2Q8NHY0 566 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 CYP39A1Q9NYL5 469 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 ADA2Q9NZK5 511 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 RNF103-CHMP3A0A140T963 221 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 SLC37A4O43826 429 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 SCUBE1Q8IWY4 988 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 E2F7Q96AV8 911 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 CDHR1Q96JP9 859 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 GPBP1L1Q9HC44 474 aaPredicted RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 ADCY3O60266 1144 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 RPL21P46778 160 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 PCYT1AP49585 367 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 MIIPQ5JXC2 388 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 RNF169Q8NCN4 708 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 KLF6Q99612 283 aaPredicted RBP18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 BAG5Q9UL15 447 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 FIS1Q9Y3D6 152 aa18.11■□□□□ 0.49
HMGXB3-201ENST00000502717 LIN7AO14910 233 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 RALAP11233 206 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 GZMAP12544 262 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 ELMSAN1Q6PJG2 1045 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 OPTNQ96CV9 577 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 APOL6Q9BWW8 343 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 TBC1D22BQ9NU19 505 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 MARCOQ9UEW3 520 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 FOXN3O00409 490 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 SNRPAP09012 282 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 ACBD5Q5T8D3 534 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 MIS18BP1Q6P0N0 1132 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 SCFD1Q8WVM8 642 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 HEY1Q9Y5J3 304 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 ORC6Q9Y5N6 252 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 PXDNQ92626 1479 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 FKBP6O75344 327 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 NUDT17P0C025 328 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 EIF3EP60228 445 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 BTNL10A8MVZ5 291 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 PSAPP07602 524 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 SERPINB9P50453 376 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 KCNJ2P63252 427 aa18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 ROR2Q01974 943 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-201ENST00000502717 CNGA2Q16280 664 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms