RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CCDC151A5D8V7 595 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 TMEM88BA6NKF7 163 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 RRP9O43818 475 aaKnown RBP19.52■□□□□ 0.72
LINC00535-201ENST00000501400 CLSTN1O94985 981 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 CYP1A1P04798 512 aaPredicted RBP19.52■□□□□ 0.72
LINC00535-201ENST00000501400 CYBAP13498 195 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 AKR1A1P14550 325 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 GNA15P30679 374 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 HOXA11P31270 313 aaPredicted RBP19.52■□□□□ 0.72
LINC00535-201ENST00000501400 HOXC8P31273 242 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 CAP1Q01518 475 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 FSCN1Q16658 493 aaKnown RBP19.52■□□□□ 0.72
LINC00535-201ENST00000501400 ZNF699Q32M78 642 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 CFAP221Q4G0U5 840 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 ZNF653Q96CK0 615 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 OSMRQ99650 979 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 PDCL3Q9H2J4 239 aa19.52■□□□□ 0.72
LINC00535-201ENST00000501400 RBM12Q9NTZ6 932 aaKnown RBP19.52■□□□□ 0.72
LINC00535-201ENST00000501400 HTTP42858 3142 aa19.52■□□□□ 0.71
LINC00535-201ENST00000501400 CASP8AP2Q9UKL3 1982 aa19.52■□□□□ 0.71
LINC00535-201ENST00000501400 SCN10AQ9Y5Y9 1956 aa19.52■□□□□ 0.71
LINC00535-201ENST00000501400 TREHO43280 583 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 PAFAH1B1P43034 410 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 PSMC4P43686 418 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 ZNF200P98182 395 aaPredicted RBP19.51■□□□□ 0.71
LINC00535-201ENST00000501400 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
LINC00535-201ENST00000501400 TRPC3Q13507 836 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 SMC1BQ8NDV3 1235 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 TAF4BQ92750 862 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 GPBP1L1Q9HC44 474 aaPredicted RBP19.51■□□□□ 0.71
LINC00535-201ENST00000501400 GINS2Q9Y248 185 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 DDX3YO15523 660 aaKnown RBP19.51■□□□□ 0.71
LINC00535-201ENST00000501400 FCGRTP55899 365 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 LACTBP83111 547 aaPredicted RBP19.51■□□□□ 0.71
LINC00535-201ENST00000501400 CENPCQ03188 943 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 BRD3Q15059 726 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 WDR93Q6P2C0 686 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 SCARA5Q6ZMJ2 495 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 DNAJB3Q8WWF6 145 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 ASB7Q9H672 318 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 AMFRQ9UKV5 643 aa19.51■□□□□ 0.71
LINC00535-201ENST00000501400 MROH7Q68CQ1 1323 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 DARSP14868 501 aaKnown RBP19.5■□□□□ 0.71
LINC00535-201ENST00000501400 NOMO3P69849 1222 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 DCAF12L1Q5VU92 463 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 NAA35Q5VZE5 725 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 TMCO3Q6UWJ1 677 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 TMEM40Q8WWA1 233 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 PBKQ96KB5 322 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 NUP85Q9BW27 656 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 GCOM2Q9BZD3 368 aaPredicted RBP19.5■□□□□ 0.71
LINC00535-201ENST00000501400 CISHQ9NSE2 258 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 POLIQ9UNA4 740 aa19.5■□□□□ 0.71
LINC00535-201ENST00000501400 TARSL2A2RTX5 802 aaKnown RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 DUSP11O75319 330 aaKnown RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 CD58P19256 250 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 GRM5P41594 1212 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 KYAT1Q16773 422 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 MON1BQ7L1V2 547 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 MCOLN2Q8IZK6 566 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 USP38Q8NB14 1042 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ZNF564Q8TBZ8 553 aaPredicted RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 CPA5Q8WXQ8 436 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 CYFIP2Q96F07 1278 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ADPGKQ9BRR6 497 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 KATNAL1Q9BW62 490 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 DNAH12Q6ZR08 3092 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 PDCD11Q14690 1871 aaKnown RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ITGB3P05106 788 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 WEE2P0C1S8 567 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 SSTR3P32745 418 aaPredicted RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 FLT3LGP49771 235 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 DCAF4L1Q3SXM0 396 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 PASD1Q8IV76 773 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 RASGEF1CQ8N431 466 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ACTRT1Q8TDG2 376 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 CALR3Q96L12 384 aaKnown RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ZSWIM1Q9BR11 485 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 CNOT8Q9UFF9 292 aaKnown RBP19.49■□□□□ 0.71
LINC00535-201ENST00000501400 TMEM59LQ9UK28 342 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 ALG6Q9Y672 507 aa19.49■□□□□ 0.71
LINC00535-201ENST00000501400 THAP12O43422 761 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 NPTXRO95502 500 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 KRT19P08727 400 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 GUCY2FP51841 1108 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 RNASE9P60153 205 aaKnown RBP19.48■□□□□ 0.71
LINC00535-201ENST00000501400 CDC42EP1Q00587 391 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 TRIM72Q6ZMU5 477 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 CATSPER4Q7RTX7 472 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 CPNE8Q86YQ8 564 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 HNRNPLLQ8WVV9 542 aaKnown RBP19.48■□□□□ 0.71
LINC00535-201ENST00000501400 BTBD6Q96KE9 485 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 ACAP3Q96P50 834 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 LRRC1Q9BTT6 524 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 EIF2AQ9BY44 585 aaKnown RBP19.48■□□□□ 0.71
LINC00535-201ENST00000501400 BCO2Q9BYV7 579 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 CXCL16Q9H2A7 254 aa19.48■□□□□ 0.71
LINC00535-201ENST00000501400 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms