RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 STILQ15468 1287 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 WDR72Q3MJ13 1102 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 GJB7Q6PEY0 223 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 SYT10Q6XYQ8 523 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF571Q7Z3V5 609 aaPredicted RBP9.05□□□□□ -0.96
SF3A1-210ENST00000498259 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ARHGEF19Q8IW93 802 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 RHOT2Q8IXI1 618 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 SLC43A3Q8NBI5 491 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 OR5B17Q8NGF7 314 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 HPDLQ96IR7 371 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 SNX27Q96L92 541 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF518BQ9C0D4 1074 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 MIS12Q9H081 205 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 SNTG2Q9NY99 539 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 CNTN6Q9UQ52 1028 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 GIT1Q9Y2X7 761 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 NOC2LQ9Y3T9 749 aaKnown RBP9.05□□□□□ -0.96
SF3A1-210ENST00000498259 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 EVPLQ92817 2033 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ZSWIM8A7E2V4 1837 aa9.05□□□□□ -0.96
SF3A1-210ENST00000498259 ANKRD62A6NC57 917 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 DCDC2CA8MYV0 355 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CYP26A1O43174 497 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 ZNF623O75123 536 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 RECQL4O94761 1208 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 VNN1O95497 513 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 LSM8O95777 96 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 EOMESO95936 686 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CHRNA1P02708 482 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 ITGB3P05106 788 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 NFICP08651 508 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 PAEPP09466 180 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 TMEM253P0C7T8 217 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 COL6A1P12109 1028 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CCL5P13501 91 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 FGFR4P22455 802 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 RPL9P32969 192 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 MYL6P60660 151 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 APBA1Q02410 837 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 MGAT3Q09327 533 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 HIC1Q14526 733 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CLUL1Q15846 466 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 SV2CQ496J9 727 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 XKR4Q5GH76 650 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 FBXO47Q5MNV8 452 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 LIN9Q5TKA1 542 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 LMBRD2Q68DH5 695 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 FBXO46Q6PJ61 603 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 TMEM270Q6UE05 265 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 ALKAL1Q6UXT8 129 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 FAM228AQ86W67 206 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CDR2LQ86X02 465 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 CEP120Q8N960 986 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 ANKLE1Q8NAG6 615 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 U2AF1L4Q8WU68 220 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 APBB2Q92870 758 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 TATDN2Q93075 761 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 VCPIP1Q96JH7 1222 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 KREMEN1Q96MU8 473 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 DEFB118Q96PH6 123 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 NAPGQ99747 312 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-210ENST00000498259 PI4K2AQ9BTU6 479 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 GPR88Q9GZN0 384 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 FAM105AQ9NUU6 356 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 PADI3Q9ULW8 664 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 AGAP1Q9UPQ3 857 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 IPPQ9Y573 584 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 GRIN2DO15399 1336 aa9.04□□□□□ -0.96
SF3A1-210ENST00000498259 A0A0U1RQF3 1178 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 MACROD2A1Z1Q3 448 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 URI1O94763 535 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-210ENST00000498259 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-210ENST00000498259 THP07101 528 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 CTSHP09668 335 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 CKBP12277 381 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 SELPP16109 830 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 PRLRP16471 622 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 GNA15P30679 374 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
SF3A1-210ENST00000498259 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
SF3A1-210ENST00000498259 GPC5P78333 572 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 CAP1Q01518 475 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 ZBTB6Q15916 424 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 EFCAB13Q8IY85 973 aa9.03□□□□□ -0.96
SF3A1-210ENST00000498259 RPUSD2Q8IZ73 545 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms