RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TFF2Q03403 129 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 SPAG1Q07617 926 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 KCNC3Q14003 757 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 KCNB1Q14721 858 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 HS2ST1Q7LGA3 356 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 BRSK2Q8IWQ3 736 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 NELFCDQ8IXH7 590 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 VN1R2Q8NFZ6 395 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 HASPINQ8TF76 798 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 SAAL1Q96ER3 474 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 FAM213AQ9BRX8 229 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 GPR62Q9BZJ7 368 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 ASB7Q9H672 318 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 MRPL17Q9NRX2 175 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 AGPAT3Q9NRZ7 376 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 CLDND1Q9NY35 253 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 UBQLN1Q9UMX0 589 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 DERAQ9Y315 318 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 PODXLO00592 558 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 PER2O15055 1255 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 XPOTO43592 962 aaKnown RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 EXTL3O43909 919 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 LILRB3O75022 631 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 IL18RAPO95256 599 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 CXCL14O95715 111 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 NFICP08651 508 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 KCNA5P22460 613 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 LRPAP1P30533 357 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 CA8P35219 290 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 LTBRP36941 435 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 DSG1Q02413 1049 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 ELAVL2Q12926 359 aaKnown RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 ADAM15Q13444 863 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 PNOCQ13519 176 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 AAK1Q2M2I8 961 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 USP41Q3LFD5 358 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 JADE1Q6IE81 842 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 CLEC17AQ6ZS10 378 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 TAS1R1Q7RTX1 841 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 C12orf56Q8IXR9 622 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 GPR65Q8IYL9 337 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 ZSWIM2Q8NEG5 633 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 B3GALT6Q96L58 329 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 IGFLR1Q9H665 355 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 HSPBP1Q9NZL4 362 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
ERCC8-208ENST00000497892 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
ERCC8-208ENST00000497892 TTC28Q96AY4 2481 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 TSC2P49815 1807 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 A0A0C4DFX4 3053 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 GOLGA8IPA6NC78 632 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 GOLGA8JA6NMD2 632 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 C2CD2LO14523 706 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 WNT7BP56706 349 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 UBE2HP62256 183 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 MRPS5P82675 430 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 RBM10P98175 930 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 TMEM132DQ14C87 1099 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 RTP2Q5QGT7 225 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 SPATA1Q5VX52 437 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 TMEM184AQ6ZMB5 413 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 ELOA2Q8IYF1 753 aaPredicted RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 FBXL18Q96ME1 805 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 ASB2Q96Q27 587 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 EMILIN2Q9BXX0 1053 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 KCTD10Q9H3F6 313 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 PCIF1Q9H4Z3 704 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 CLEC1BQ9P126 229 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 HOOK1Q9UJC3 728 aaKnown RBP12.19□□□□□ -0.46
ERCC8-208ENST00000497892 HCFC2Q9Y5Z7 792 aa12.19□□□□□ -0.46
ERCC8-208ENST00000497892 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
ERCC8-208ENST00000497892 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
ERCC8-208ENST00000497892 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
ERCC8-208ENST00000497892 FGFR3P22607 806 aa12.18□□□□□ -0.46
ERCC8-208ENST00000497892 NDUFV1P49821 464 aa12.18□□□□□ -0.46
ERCC8-208ENST00000497892 KCNQ1P51787 676 aa12.18□□□□□ -0.46
ERCC8-208ENST00000497892 CREMQ03060 361 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms