RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 ZACNQ401N2 412 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 KDM7AQ6ZMT4 941 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 SMARCAD1Q9H4L7 1026 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 AGO2Q9UKV8 859 aaKnown RBP12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 COL1A2P08123 1366 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 K7ERI5 159 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 FAM189A1O60320 539 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ATP2C2O75185 946 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TNFAIP3P21580 790 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 FOXD4Q12950 439 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 PRPF4BQ13523 1007 aaKnown RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 CABS1Q96KC9 395 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 KIF4AO95239 1232 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 CHRNB2P17787 502 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TMOD1P28289 359 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ACBD5Q5T8D3 534 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TRIM7Q9C029 511 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 MCM3APO60318 1980 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 CNTNAP2Q9UHC6 1331 aa12.35□□□□□ -0.43
SNRNP200-208ENST00000497539 ABLIM1O14639 778 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 HBP1O60381 514 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 MSCO60682 206 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 PROZP22891 400 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 POU5F1Q01860 360 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ACTN3Q08043 901 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 LAMC2Q13753 1193 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 SPRED3Q2MJR0 410 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 EAPPQ56P03 285 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 C11orf63Q6NUN7 778 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ARMCX2Q7L311 632 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF677Q86XU0 584 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 LINC01465Q8N7H1 131 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 HES6Q96HZ4 224 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 PDHXO00330 501 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ASAP2O43150 1006 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 SORBS3O60504 671 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF24P17028 368 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 BTBD19C9JJ37 291 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 KCNK3O14649 394 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 EDN1P05305 212 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 SLC8A3P57103 927 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 NLRP11P59045 1033 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 CDR2Q01850 454 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 MCL1Q07820 350 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 LSM14AQ8ND56 463 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 BRI3BPQ8WY22 251 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 CTNNBL1Q8WYA6 563 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 CCDC127Q96BQ5 260 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 TOPORSQ9NS56 1045 aaPredicted RBP12.34□□□□□ -0.43
SNRNP200-208ENST00000497539 TOM1L1O75674 476 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 FSBPO95073 299 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 FLT3P36888 993 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms