RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ATRNL1Q5VV63 1379 aa5.03□□□□□ -1.6
SMC4-225ENST00000497203 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 PRR5-ARHGAP8B1AHC4 643 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 B5MCH6 92 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 H3BUI4 141 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 PHGDHO43175 533 aaKnown RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 FRS3O43559 492 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 TYRP14679 529 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 ALOX15P16050 662 aaPredicted RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 MALP21145 153 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 FLT3LGP49771 235 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 NEK3P51956 506 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 RAB1AP62820 205 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 RABL3Q5HYI8 236 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 FAM47AQ5JRC9 791 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 FNDC7Q5VTL7 733 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 ZNF572Q7Z3I7 529 aaPredicted RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 SLC16A11Q8NCK7 471 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 RNF169Q8NCN4 708 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 IFI44Q8TCB0 444 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 MORC4Q8TE76 937 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 SLC35A4Q96G79 324 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 DMRTA2Q96SC8 542 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 NUP62CLQ9H1M0 184 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 CHST12Q9NRB3 414 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 CNNM1Q9NRU3 951 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 GNL3LQ9NVN8 582 aaKnown RBP5.02□□□□□ -1.61
SMC4-225ENST00000497203 PNPOQ9NVS9 261 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 PCDHA3Q9Y5H8 950 aa5.02□□□□□ -1.61
SMC4-225ENST00000497203 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 PLEKHD1A6NEE1 506 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 LEFTY2O00292 366 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 NARSO43776 548 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 PQBP1O60828 265 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 FSHBP01225 129 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 AMY1AP04745 511 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 RPL17P18621 184 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 PEX2P28328 305 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 AK2P54819 239 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 ATP8B2P98198 1209 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 MTM1Q13496 603 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 TUBA3CQ13748 450 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 LONRF3Q496Y0 759 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 GORABQ5T7V8 394 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 TUBA3EQ6PEY2 450 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SYT12Q8IV01 421 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 STON2Q8WXE9 905 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SLC39A13Q96H72 371 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SORCS2Q96PQ0 1159 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 STRBPQ96SI9 672 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 VRK1Q99986 396 aaPredicted RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 ELAC2Q9BQ52 826 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 POLR3GLQ9BT43 218 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 LRRC27Q9C0I9 530 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SCAND2PQ9GZW5 306 aaPredicted RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 MYH16Q9H6N6 1097 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SARS2Q9NP81 518 aaKnown RBP5.01□□□□□ -1.61
SMC4-225ENST00000497203 SLC2A4RGQ9NR83 387 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 ABCF2Q9UG63 623 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 SORCS3Q9UPU3 1222 aa5.01□□□□□ -1.61
SMC4-225ENST00000497203 A0A1W2PPL8 197 aa5□□□□□ -1.61
SMC4-225ENST00000497203 LRRC14BA6NHZ5 514 aa5□□□□□ -1.61
SMC4-225ENST00000497203 EIF3JO75822 258 aaKnown RBP5□□□□□ -1.61
SMC4-225ENST00000497203 ZNF202O95125 648 aa5□□□□□ -1.61
SMC4-225ENST00000497203 FPR1P21462 350 aa5□□□□□ -1.61
SMC4-225ENST00000497203 APOBEC3AP31941 199 aaPredicted RBP5□□□□□ -1.61
SMC4-225ENST00000497203 ZNF280AP59817 542 aaPredicted RBP5□□□□□ -1.61
SMC4-225ENST00000497203 CREMQ03060 361 aa5□□□□□ -1.61
SMC4-225ENST00000497203 IFIT5Q13325 482 aaKnown RBP5□□□□□ -1.61
SMC4-225ENST00000497203 SNAPC2Q13487 334 aa5□□□□□ -1.61
SMC4-225ENST00000497203 MORC3Q14149 939 aa5□□□□□ -1.61
SMC4-225ENST00000497203 PLS1Q14651 629 aa5□□□□□ -1.61
SMC4-225ENST00000497203 AFMIDQ63HM1 303 aa5□□□□□ -1.61
SMC4-225ENST00000497203 DRICH1Q6PGQ1 229 aaPredicted RBP5□□□□□ -1.61
SMC4-225ENST00000497203 KRT78Q8N1N4 520 aa5□□□□□ -1.61
SMC4-225ENST00000497203 ZGPATQ8N5A5 531 aaKnown RBP5□□□□□ -1.61
SMC4-225ENST00000497203 OR10H5Q8NGA6 315 aa5□□□□□ -1.61
SMC4-225ENST00000497203 CPT1CQ8TCG5 803 aa5□□□□□ -1.61
SMC4-225ENST00000497203 BRIX1Q8TDN6 353 aaKnown RBP5□□□□□ -1.61
SMC4-225ENST00000497203 TFAP2CQ92754 450 aa5□□□□□ -1.61
SMC4-225ENST00000497203 BTBD1Q9H0C5 482 aa5□□□□□ -1.61
SMC4-225ENST00000497203 BHMT2Q9H2M3 363 aa5□□□□□ -1.61
SMC4-225ENST00000497203 ARMT1Q9H993 441 aa5□□□□□ -1.61
SMC4-225ENST00000497203 KLHL11Q9NVR0 708 aa5□□□□□ -1.61
SMC4-225ENST00000497203 SIDT1Q9NXL6 827 aaKnown RBP5□□□□□ -1.61
SMC4-225ENST00000497203 TPCN1Q9ULQ1 816 aa5□□□□□ -1.61
SMC4-225ENST00000497203 PHTF1Q9UMS5 762 aa5□□□□□ -1.61
SMC4-225ENST00000497203 HS3ST3A1Q9Y663 406 aa5□□□□□ -1.61
SMC4-225ENST00000497203 PNPLA7Q6ZV29 1317 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 AHRRA9YTQ3 701 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 FOXN3O00409 490 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms