RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CLPTM1LQ96KA5 538 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 NEU1Q99519 415 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 TEX101Q9BY14 249 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 C11orf54Q9H0W9 315 aaPredicted RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 R3HDMLQ9H3Y0 253 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 FBXO34Q9NWN3 711 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 FAM30AQ9NZY2 134 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 ATP11BQ9Y2G3 1177 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 PCDHB1Q9Y5F3 818 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 IL33O95760 270 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 RPLP2P05387 115 aaKnown RBP4.96□□□□□ -1.62
CD46-218ENST00000496723 SPATA31D3P0C874 917 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 SLC6A2P23975 617 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 TTF1Q15361 905 aaPredicted RBP4.96□□□□□ -1.62
CD46-218ENST00000496723 TMEM240Q5SV17 173 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 AGAP9Q5VTM2 703 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 TSHZ3Q63HK5 1081 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 ARMC6Q6NXE6 501 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 FBXO42Q6P3S6 717 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 SPATA31D4Q6ZUB0 917 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 DCBLD1Q8N8Z6 715 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 HOOK2Q96ED9 719 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 REXO4Q9GZR2 422 aaKnown RBP4.96□□□□□ -1.62
CD46-218ENST00000496723 GSTO2Q9H4Y5 243 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 IP6K2Q9UHH9 426 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 SPATA31A6Q5VVP1 1343 aa4.96□□□□□ -1.62
CD46-218ENST00000496723 PRSS23O95084 383 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 ALAS1P13196 640 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 DDX6P26196 483 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD46-218ENST00000496723 ZNF280AP59817 542 aaPredicted RBP4.95□□□□□ -1.62
CD46-218ENST00000496723 RAB39AQ14964 217 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 DACT2Q5SW24 774 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 GADL1Q6ZQY3 521 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 TTC7BQ86TV6 843 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 RHOT2Q8IXI1 618 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 CPEB3Q8NE35 698 aaKnown RBP4.95□□□□□ -1.62
CD46-218ENST00000496723 OR56A1Q8NGH5 318 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 MRGPRX4Q96LA9 322 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 PRDM13Q9H4Q3 707 aa4.95□□□□□ -1.62
CD46-218ENST00000496723 CFAP20Q9Y6A4 193 aaKnown RBP4.95□□□□□ -1.62
CD46-218ENST00000496723 CDHR4A6H8M9 788 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 GRM6O15303 877 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 ESRRBO95718 433 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 SBK3P0C264 359 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 PDCP20941 246 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 CXCR5P32302 372 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 MXRA7P84157 204 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 DSC2Q02487 901 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 FITM2Q8N6M3 262 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 SIMC1Q8NDZ2 872 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 NLGN4YQ8NFZ3 816 aaPredicted RBP4.94□□□□□ -1.62
CD46-218ENST00000496723 NSUN6Q8TEA1 469 aaKnown RBP4.94□□□□□ -1.62
CD46-218ENST00000496723 DMRTA2Q96SC8 542 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 VRK1Q99986 396 aaPredicted RBP4.94□□□□□ -1.62
CD46-218ENST00000496723 TCF7L1Q9HCS4 588 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 KLHL11Q9NVR0 708 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 MAP3K2Q9Y2U5 619 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 FPGT-TNNI3KV9GXZ4 949 aa4.94□□□□□ -1.62
CD46-218ENST00000496723 COL11A2P13942 1736 aaPredicted RBP4.94□□□□□ -1.62
CD46-218ENST00000496723 MARCH11A6NNE9 402 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 DTNBO60941 627 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 CD1AP06126 327 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 POU2F2P09086 479 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 CT47B1P0C2W7 299 aaPredicted RBP4.93□□□□□ -1.62
CD46-218ENST00000496723 PF4V1P10720 104 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 MTHFD1P11586 935 aaKnown RBP4.93□□□□□ -1.62
CD46-218ENST00000496723 GCSHP23434 173 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 SLC6A4P31645 630 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 TLE1Q04724 770 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 MCL1Q07820 350 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 FOXI1Q12951 378 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
CD46-218ENST00000496723 PABPC1LQ4VXU2 614 aaKnown RBP4.93□□□□□ -1.62
CD46-218ENST00000496723 USP45Q70EL2 814 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 CATIPQ7Z7H3 387 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 GLCCI1Q86VQ1 547 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 MAPKAPK5Q8IW41 473 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 TBC1D15Q8TC07 691 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 CALCOCO1Q9P1Z2 691 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 ANKRD6Q9Y2G4 727 aa4.93□□□□□ -1.62
CD46-218ENST00000496723 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 A0A1B0GTW7 788 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 LRRC14BA6NHZ5 514 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 HAUS5O94927 633 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 ABLIM3O94929 683 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 C1RP00736 705 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 CFIP05156 583 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 ELANEP08246 267 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 EGR2P11161 476 aaPredicted RBP4.92□□□□□ -1.62
CD46-218ENST00000496723 CKBP12277 381 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 VCAM1P19320 739 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 RAB27AP51159 221 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 NOMO3P69849 1222 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 RESTQ13127 1097 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 PIN1Q13526 163 aaPredicted RBP4.92□□□□□ -1.62
CD46-218ENST00000496723 NOMO2Q5JPE7 1267 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms