RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-213ENST00000496347 ATL3Q6DD88 541 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 GET4Q7L5D6 327 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-213ENST00000496347 FBXL6Q8N531 539 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 FAM122AQ96E09 287 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 STRA6Q9BX79 667 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 LRRC27Q9C0I9 530 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
HDAC4-213ENST00000496347 ZFP37Q9Y6Q3 630 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-213ENST00000496347 NOTCH4Q99466 2003 aa17.08■□□□□ 0.33
HDAC4-213ENST00000496347 LACTBL1A8MY62 500 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 M0QZQ0 153 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 CUTAO60888 179 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 IDEP14735 1019 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 PAX3P23760 479 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 TDGQ13569 410 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 MRPL58Q14197 206 aaKnown RBP17.08■□□□□ 0.32
HDAC4-213ENST00000496347 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 POSTNQ15063 836 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
HDAC4-213ENST00000496347 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
HDAC4-213ENST00000496347 BEST2Q8NFU1 509 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 ZNF461Q8TAF7 563 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 NXPE3Q969Y0 559 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 OXCT2Q9BYC2 517 aaPredicted RBP17.08■□□□□ 0.32
HDAC4-213ENST00000496347 ASB7Q9H672 318 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 MAGEF1Q9HAY2 307 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 KCNK12Q9HB15 430 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 AGO2Q9UKV8 859 aaKnown RBP17.08■□□□□ 0.32
HDAC4-213ENST00000496347 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 DUSP12Q9UNI6 340 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 SCN1AP35498 2009 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 TCHHQ07283 1943 aa17.08■□□□□ 0.32
HDAC4-213ENST00000496347 GCNT3O95395 438 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 NFICP08651 508 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 FSHRP23945 695 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 SPAG1Q07617 926 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 E2F4Q16254 413 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 CTXN3Q4LDR2 81 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 SPATA1Q5VX52 437 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 TPGS2Q68CL5 300 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 PDILTQ8N807 584 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 POMGNT1Q8WZA1 660 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 ACCSQ96QU6 501 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 MYADMQ96S97 322 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 PRRX2Q99811 253 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 FBXL5Q9UKA1 691 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 PCDHB13Q9Y5F0 798 aa17.07■□□□□ 0.32
HDAC4-213ENST00000496347 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 TISP43B9A030 160 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 ANKRD63C9JTQ0 380 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 CCL16O15467 120 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 ABLIM3O94929 683 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 ATF2P15336 505 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 YWHAHQ04917 246 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-213ENST00000496347 CNNM4Q6P4Q7 775 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 GRASPQ7Z6J2 395 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-213ENST00000496347 CCDC65Q8IXS2 484 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 IQUBQ8NA54 791 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
HDAC4-213ENST00000496347 PRRG1O14668 218 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 OAZ2O95190 189 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 IL18RAPO95256 599 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 LAMP2P13473 410 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 TYMPP19971 482 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 ADSSP30520 456 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 ELF1P32519 619 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 ACOT2P49753 483 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 CASP5P51878 434 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 AMPD3Q01432 767 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 NT5DC4Q86YG4 428 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 TCEAL8Q8IYN2 117 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 FAM212AQ96EL1 285 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 TRIM9Q9C026 710 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
HDAC4-213ENST00000496347 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 CDH7Q9ULB5 785 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 POLIQ9UNA4 740 aa17.05■□□□□ 0.32
HDAC4-213ENST00000496347 ANHXE9PGG2 379 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 LRG1P02750 347 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 ODC1P11926 461 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 GARTP22102 1010 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 KCNA1Q09470 495 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 HTR4Q13639 388 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 PKP1Q13835 747 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 PABPC1LQ4VXU2 614 aaKnown RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-213ENST00000496347 C9orf57Q5W0N0 161 aa17.04■□□□□ 0.32
HDAC4-213ENST00000496347 USP37Q86T82 979 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms