RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TAS1R2Q8TE23 839 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 PRPF31Q8WWY3 499 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 FAXDC2Q96IV6 333 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 PSMB7Q99436 277 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 PCYT2Q99447 389 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.41□□□□□ -1.222e-6■□□□□ 8.4
USP39-219ENST00000496047 GPR88Q9GZN0 384 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 RAB17Q9H0T7 212 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 WNT8AQ9H1J5 351 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ISCUQ9H1K1 167 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 CARD9Q9H257 536 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 ABHD16BQ9H3Z7 469 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SLITRK6Q9H5Y7 841 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 RPF1Q9H9Y2 349 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 MRPL47Q9HD33 250 aaKnown RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 ZHX1Q9UKY1 873 aaPredicted RBP7.41□□□□□ -1.22
USP39-219ENST00000496047 MTUS1Q9ULD2 1270 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 NENFQ9UMX5 172 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP39-219ENST00000496047 PCDHB4Q9Y5E5 795 aa7.41□□□□□ -1.22
USP39-219ENST00000496047 IGKV6-21A0A0C4DH24 114 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 MANSC4A6NHS7 340 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 A6NJR5 290 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CYP26A1O43174 497 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 MED7O43513 233 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 HSF2BPO75031 334 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 MTA2O94776 668 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 SEC31AO94979 1220 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 ARIH2O95376 493 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 SGPL1O95470 568 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 FTLP02792 175 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 CLTAP09496 248 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CYP2C8P10632 490 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 DESP17661 470 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 GNA15P30679 374 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CXCR5P32302 372 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 GBP1P32455 592 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 VSNL1P62760 191 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NOP14P78316 857 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 MCL1Q07820 350 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NNTQ13423 1086 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CUL2Q13617 745 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NCOA4Q13772 614 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 GRB14Q14449 540 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 PCBP1Q15365 356 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP39-219ENST00000496047 DGKDQ16760 1214 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 DUOXA2Q1HG44 320 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 SGSM1Q2NKQ1 1148 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 DCAF4L1Q3SXM0 396 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 C1orf220Q5T0J3 134 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 TAF3Q5VWG9 929 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 SPRYD7Q5W111 196 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 MAP1SQ66K74 1059 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 IQSEC1Q6DN90 963 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 ACAD10Q6JQN1 1059 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 EMBQ6PCB8 327 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 MAMDC4Q6UXC1 1216 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 DLK2Q6UY11 383 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 SLFN11Q7Z7L1 901 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 ZBTB33Q86T24 672 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NT5DC3Q86UY8 548 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 ZNF410Q86VK4 478 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 TTC39CQ8N584 583 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 USP38Q8NB14 1042 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NOA1Q8NC60 698 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 ZNF564Q8TBZ8 553 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 PLEKHO2Q8TD55 490 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 HELQQ8TDG4 1101 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 COG1Q8WTW3 980 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 FGD4Q96M96 766 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 RPS6KC1Q96S38 1066 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 PNKPQ96T60 521 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 ACO2Q99798 780 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 KATNAL1Q9BW62 490 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 THAP2Q9H0W7 228 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 FAM124BQ9H5Z6 455 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 IL21Q9HBE4 155 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 PDE11AQ9HCR9 933 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 ABCB6Q9NP58 842 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 MED4Q9NPJ6 270 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 SALL4Q9UJQ4 1053 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NOCTQ9UK39 431 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 TNFSF13BQ9Y275 285 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.22
USP39-219ENST00000496047 PCDHB3Q9Y5E6 796 aa7.4□□□□□ -1.22
USP39-219ENST00000496047 CUL9Q8IWT3 2517 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 ADGRA2Q96PE1 1338 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 CNTNAP2Q9UHC6 1331 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 KRIT1O00522 736 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 THAP12O43422 761 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 OPA1O60313 960 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 MSCO60682 206 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
USP39-219ENST00000496047 HEXIM1O94992 359 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms