RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 DNMT3BQ9UBC3 853 aaKnown RBP13.86□□□□□ -0.19
PTPRF-214ENST00000496043 SEL1LQ9UBV2 794 aa13.86□□□□□ -0.19
PTPRF-214ENST00000496043 TUBGCP4Q9UGJ1 667 aa13.86□□□□□ -0.19
PTPRF-214ENST00000496043 CPSF3Q9UKF6 684 aaKnown RBP13.86□□□□□ -0.19
PTPRF-214ENST00000496043 KCNH3Q9ULD8 1083 aa13.86□□□□□ -0.19
PTPRF-214ENST00000496043 MAFFQ9ULX9 164 aa13.86□□□□□ -0.19
PTPRF-214ENST00000496043 ARHGEF37A1IGU5 675 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 WDR27A2RRH5 827 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 MYMKA6NI61 221 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ANKRD63C9JTQ0 380 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 M0QZQ0 153 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 STK25O00506 426 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
PTPRF-214ENST00000496043 FAM189A1O60320 539 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 LRG1P02750 347 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 CFHP08603 1231 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 SRFP11831 508 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 GAP43P17677 238 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 PAX3P23760 479 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 MRE11P49959 708 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 POSTNQ15063 836 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 PABPC1LQ4VXU2 614 aaKnown RBP13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ADALQ6DHV7 355 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 SLC39A4Q6P5W5 647 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 DSTYKQ6XUX3 929 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 TCEAL8Q8IYN2 117 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 SIX5Q8N196 739 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 TMEM105Q8N8V8 129 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ITFG1Q8TB96 612 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 FGF13Q92913 245 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 SNX21Q969T3 373 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ZNF396Q96N95 335 aaPredicted RBP13.85□□□□□ -0.19
PTPRF-214ENST00000496043 RTP3Q9BQQ7 232 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 OXCT2Q9BYC2 517 aaPredicted RBP13.85□□□□□ -0.19
PTPRF-214ENST00000496043 CYP4F11Q9HBI6 524 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 HCFC1R1Q9NWW0 138 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 STYXL1Q9Y6J8 313 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 TRIP11Q15643 1979 aa13.85□□□□□ -0.19
PTPRF-214ENST00000496043 C2orf16Q68DN1 1984 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 OAZ2O95190 189 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 NPR3P17342 541 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 POU5F1Q01860 360 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 YWHAHQ04917 246 aaPredicted RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 HTR4Q13639 388 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 STK38Q15208 465 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 JADE1Q6IE81 842 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 MTSS1LQ765P7 747 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 USP37Q86T82 979 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 SFR1Q86XK3 245 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 ATOH1Q92858 354 aaPredicted RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 DNAJC19Q96DA6 116 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 ACCSQ96QU6 501 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 ASB7Q9H672 318 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 MRPL44Q9H9J2 332 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 AFF4Q9UHB7 1163 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 AGO2Q9UKV8 859 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 EXOC7Q9UPT5 735 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 DERAQ9Y315 318 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 MRPS23Q9Y3D9 190 aaKnown RBP13.84□□□□□ -0.19
PTPRF-214ENST00000496043 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 NUMBLQ9Y6R0 609 aa13.84□□□□□ -0.19
PTPRF-214ENST00000496043 MYH11P35749 1972 aa13.83□□□□□ -0.19
PTPRF-214ENST00000496043 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.19
PTPRF-214ENST00000496043 DENND4AQ7Z401 1863 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ZNF197O14709 1029 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 SEC24AO95486 1093 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 RHOP08100 348 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 IDEP14735 1019 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 AOC1P19801 751 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 STAT6P42226 847 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 AARSP49588 968 aaKnown RBP eCLIP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ACOT2P49753 483 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 GUCY2FP51841 1108 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ADCY1Q08828 1119 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 PARM1Q6UWI2 310 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ELMOD1Q8N336 334 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ST13P5Q8NFI4 369 aaPredicted RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 POMGNT1Q8WZA1 660 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 ZNF512Q96ME7 567 aaPredicted RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 RPP25Q9BUL9 199 aaKnown RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 STRA6Q9BX79 667 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 LRRC27Q9C0I9 530 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 AVENQ9NQS1 362 aaPredicted RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 SLC2A4RGQ9NR83 387 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 TFIP11Q9UBB9 837 aaKnown RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 CA14Q9ULX7 337 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 TIMM13Q9Y5L4 95 aaPredicted RBP13.83□□□□□ -0.2
PTPRF-214ENST00000496043 TRIOO75962 3097 aa13.83□□□□□ -0.2
PTPRF-214ENST00000496043 KRBA1A5PL33 1030 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 H0Y858 1186 aa13.82□□□□□ -0.2
PTPRF-214ENST00000496043 SPTLC2O15270 562 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms