RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 H0Y858 1186 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
APTX-233ENST00000496030 FGF18O76093 207 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CSPG5O95196 566 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 IL18RAPO95256 599 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 NFICP08651 508 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CCNE1P24864 410 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 ALDH7A1P49419 539 aaKnown RBP12.9□□□□□ -0.34
APTX-233ENST00000496030 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
APTX-233ENST00000496030 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 TTI2Q6NXR4 508 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 RDH13Q8NBN7 331 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CXorf38Q8TB03 319 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 IGSF21Q96ID5 467 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 TLR9Q9NR96 1032 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
APTX-233ENST00000496030 SPG21Q9NZD8 308 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 DERAQ9Y315 318 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
APTX-233ENST00000496030 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 PSMA7O14818 248 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 EXOC3O60645 756 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 AKAP3O75969 853 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 CYP3A5P20815 502 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 NR2F2P24468 414 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 PPP1R2P41236 205 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 CLCNKBP51801 687 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 NLRP12P59046 1061 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 ADAM9Q13443 819 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 PSMD6Q15008 389 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 UPP1Q16831 310 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 C1orf220Q5T0J3 134 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
APTX-233ENST00000496030 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 C3orf58Q8NDZ4 430 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 MSLNLQ96KJ4 702 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 FAM193BQ96PV7 902 aaPredicted RBP12.89□□□□□ -0.35
APTX-233ENST00000496030 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
APTX-233ENST00000496030 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
APTX-233ENST00000496030 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
APTX-233ENST00000496030 ZNF292O60281 2723 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 ANO9A1A5B4 782 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 PPEF2O14830 753 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 MAPK13O15264 365 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 NCK2O43639 380 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 KIF4AO95239 1232 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 AVPR2P30518 371 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 LRPAP1P30533 357 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 PPM1AP35813 382 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 OR1G1P47890 313 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 ERVFC1P60507 584 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 CLDN10P78369 228 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 HSP90AA2PQ14568 343 aaPredicted RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 TAS1R1Q7RTX1 841 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 OR5B17Q8NGF7 314 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
APTX-233ENST00000496030 SCN1AP35498 2009 aa12.88□□□□□ -0.35
APTX-233ENST00000496030 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 PRR23AA6NEV1 266 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 PIRO00625 290 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
APTX-233ENST00000496030 PTMSP20962 102 aa12.87□□□□□ -0.35
APTX-233ENST00000496030 STX17P56962 302 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms