RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 SMC2O95347 1197 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 C1RP00736 705 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 PAX3P23760 479 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 KLRC2P26717 231 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 TKTP29401 623 aaKnown RBP21.7■■□□□ 1.06
COL9A2-210ENST00000495948 CYP2J2P51589 502 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 SMAD4Q13485 552 aaKnown RBP21.7■■□□□ 1.06
COL9A2-210ENST00000495948 PSMD5Q16401 504 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 SNRNP35Q16560 246 aaKnown RBP21.7■■□□□ 1.06
COL9A2-210ENST00000495948 C9orf57Q5W0N0 161 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 ANKRD54Q6NXT1 300 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 CEP57Q86XR8 500 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 GUF1Q8N442 669 aaKnown RBP21.7■■□□□ 1.06
COL9A2-210ENST00000495948 NOC3LQ8WTT2 800 aaKnown RBP21.7■■□□□ 1.06
COL9A2-210ENST00000495948 MTRRQ9UBK8 725 aa21.7■■□□□ 1.06
COL9A2-210ENST00000495948 PLXNA3P51805 1871 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 ANO9A1A5B4 782 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 CLIC2O15247 247 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 HOXB8P17481 243 aaPredicted RBP21.69■■□□□ 1.06
COL9A2-210ENST00000495948 SURF1Q15526 300 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 PTCRAQ6ISU1 281 aaPredicted RBP21.69■■□□□ 1.06
COL9A2-210ENST00000495948 PRSS55Q6UWB4 352 aaPredicted RBP21.69■■□□□ 1.06
COL9A2-210ENST00000495948 ANKS3Q6ZW76 656 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 SLC9A9Q8IVB4 645 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 TMEM130Q8N3G9 435 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 LNX1Q8TBB1 728 aaPredicted RBP21.69■■□□□ 1.06
COL9A2-210ENST00000495948 SMARCE1Q969G3 411 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 GTPBP4Q9BZE4 634 aaKnown RBP21.69■■□□□ 1.06
COL9A2-210ENST00000495948 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 FAM50BQ9Y247 325 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 TSC2P49815 1807 aa21.69■■□□□ 1.06
COL9A2-210ENST00000495948 I3L4J1 428 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 M0QZQ0 153 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 PIRO00625 290 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 PPEF2O14830 753 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 GLUD1P00367 558 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 BMP1P13497 986 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 EPCAMP16422 314 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 NFIL3Q16649 462 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 COBLL1Q53SF7 1204 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 PDE11AQ9HCR9 933 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 DPP3Q9NY33 737 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 PCDHB8Q9UN66 801 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 PCDHA5Q9Y5H7 936 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 BACE2Q9Y5Z0 518 aa21.68■■□□□ 1.06
COL9A2-210ENST00000495948 GRXCR2A6NFK2 248 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 MBTPS2O43462 519 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 CALUO43852 315 aaPredicted RBP21.67■■□□□ 1.06
COL9A2-210ENST00000495948 TFAMQ00059 246 aaKnown RBP21.67■■□□□ 1.06
COL9A2-210ENST00000495948 CYP24A1Q07973 514 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 MYBPC2Q14324 1141 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 PSMD6Q15008 389 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 CLUL1Q15846 466 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 ZNF658Q5TYW1 1059 aaPredicted RBP21.67■■□□□ 1.06
COL9A2-210ENST00000495948 WDR49Q8IV35 697 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 CACTINQ8WUQ7 758 aaKnown RBP21.67■■□□□ 1.06
COL9A2-210ENST00000495948 ZNF560Q96MR9 790 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 DMAC2Q9NW81 257 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 DPP7Q9UHL4 492 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 ITGA11Q9UKX5 1188 aa21.67■■□□□ 1.06
COL9A2-210ENST00000495948 EXOC3O60645 756 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 PRPF40AO75400 957 aaKnown RBP21.66■■□□□ 1.06
COL9A2-210ENST00000495948 NR3C1P04150 777 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 TMEM191BP0C7N4 346 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 RPL17P18621 184 aaKnown RBP21.66■■□□□ 1.06
COL9A2-210ENST00000495948 VARS2Q5ST30 1063 aaKnown RBP21.66■■□□□ 1.06
COL9A2-210ENST00000495948 SYCE2Q6PIF2 218 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 ELMSAN1Q6PJG2 1045 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 C1orf127Q8N9H9 656 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 APPL2Q8NEU8 664 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 ANKRD36BP1Q96IX9 119 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 CLSTN3Q9BQT9 956 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 MTMR12Q9C0I1 747 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 SFXN1Q9H9B4 322 aa21.66■■□□□ 1.06
COL9A2-210ENST00000495948 PTPRJQ12913 1337 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 ARHGEF37A1IGU5 675 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 IL9P15248 144 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 PNPLA4P41247 253 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 TAF6P49848 677 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 LILRA4P59901 499 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 SMAD2Q15796 467 aaKnown RBP21.65■■□□□ 1.06
COL9A2-210ENST00000495948 ZCWPW2Q504Y3 356 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 ZNF280DQ6N043 979 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 SMYD4Q8IYR2 804 aaPredicted RBP21.65■■□□□ 1.06
COL9A2-210ENST00000495948 ADAMTS19Q8TE59 1207 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 HDAC7Q8WUI4 952 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
COL9A2-210ENST00000495948 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 CGRRF1Q99675 332 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 MAN1C1Q9NR34 630 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 INTS13Q9NVM9 706 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 MAPK8IP1Q9UQF2 711 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 VCANP13611 3396 aa21.65■■□□□ 1.06
COL9A2-210ENST00000495948 H7C4K7 107 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 TGM5O43548 720 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 ITGB3P05106 788 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 ODC1P11926 461 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 TYMPP19971 482 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 ITIH3Q06033 890 aa21.64■■□□□ 1.05
COL9A2-210ENST00000495948 MRPL58Q14197 206 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms