RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	RBM10	P98175	930 aa	Known RBP	13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	ITIH3	Q06033	890 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	SPATA1	Q5VX52	437 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	KRBA2	Q6ZNG9	492 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	NT5DC4	Q86YG4	428 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	GRAMD1C	Q8IYS0	662 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	GLIS3	Q8NEA6	775 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	LNX1	Q8TBB1	728 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	HDAC7	Q8WUI4	952 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	RIN2	Q8WYP3	895 aa	Predicted RBP	13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	EPAS1	Q99814	870 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	S1PR5	Q9H228	398 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	IKZF4	Q9H2S9	585 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	KIAA1586	Q9HCI6	787 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	CGN	Q9P2M7	1197 aa	Known RBP	13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	C2CD2	Q9Y426	696 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	NUB1	Q9Y5A7	615 aa		13.43	□□□□□ -0.26
MRPL55-233	ENST00000495899	MYH11	P35749	1972 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	SYN3	O14994	580 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	KLRC4	O43908	158 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	EXTL3	O43909	919 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	IL9	P15248	144 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	CLUL1	Q15846	466 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	BMT2	Q1RMZ1	405 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	RTP2	Q5QGT7	225 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	JADE1	Q6IE81	842 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	ARMCX5	Q6P1M9	558 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	SYCE2	Q6PIF2	218 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	ANKS3	Q6ZW76	656 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	CEP57	Q86XR8	500 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	C3orf58	Q8NDZ4	430 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	BEST2	Q8NFU1	509 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	SCFD1	Q8WVM8	642 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	CCDC47	Q96A33	483 aa	Known RBP	13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	B3GALT6	Q96L58	329 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	FBXL18	Q96ME1	805 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	FAM213A	Q9BRX8	229 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	ADAM7	Q9H2U9	754 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	GOLPH3L	Q9H4A5	285 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	SLC39A2	Q9NP94	309 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	EXOC1	Q9NV70	894 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	TUBGCP4	Q9UGJ1	667 aa		13.42	□□□□□ -0.26
MRPL55-233	ENST00000495899	MYO7A	Q13402	2215 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	GLUD1	P00367	558 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	RPN1	P04843	607 aa	Known RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	EPCAM	P16422	314 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	IGFBP6	P24592	240 aa	Predicted RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	SPAG1	Q07617	926 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	TMEM132D	Q14C87	1099 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	PSMD5	Q16401	504 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	KNOP1	Q1ED39	458 aa	Known RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	KMT5B	Q4FZB7	885 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	CES5A	Q6NT32	575 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	LILRA6	Q6PI73	481 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	HS2ST1	Q7LGA3	356 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	ADHFE1	Q8IWW8	467 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	GPD1L	Q8N335	351 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	GOLGA5	Q8TBA6	731 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	SUSD6	Q92537	303 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	SUSD3	Q96L08	255 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	POP1	Q99575	1024 aa	Known RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	CLSTN3	Q9BQT9	956 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	CBWD1	Q9BRT8	395 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	PLEKHA4	Q9H4M7	779 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	CHMP5	Q9NZZ3	219 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	USP15	Q9Y4E8	981 aa	Predicted RBP	13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	BACE2	Q9Y5Z0	518 aa		13.41	□□□□□ -0.26
MRPL55-233	ENST00000495899	ZNF233	A6NK53	670 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	TGFB1I1	O43294	461 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	KIF20A	O95235	890 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	NFIC	P08651	508 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	BRCC3	P46736	316 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	FAM160A1	Q05DH4	1040 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	DPYD	Q12882	1025 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	STK4	Q13043	487 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	CBX2	Q14781	532 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	SURF1	Q15526	300 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	CYP26C1	Q6V0L0	522 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	BRSK2	Q8IWQ3	736 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	C12orf56	Q8IXR9	622 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	APPL2	Q8NEU8	664 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	ENGASE	Q8NFI3	743 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	CACTIN	Q8WUQ7	758 aa	Known RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	TMEM174	Q8WUU8	243 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	SAAL1	Q96ER3	474 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	NECTIN4	Q96NY8	510 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	PCIF1	Q9H4Z3	704 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	SFXN1	Q9H9B4	322 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	AGPAT3	Q9NRZ7	376 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	RBAK	Q9NYW8	714 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	MTRR	Q9UBK8	725 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	PCDHGA10	Q9Y5H3	936 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	VCAN	P13611	3396 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	TDRD15	B5MCY1	1934 aa	Known RBP	13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	ATG2A	Q2TAZ0	1938 aa		13.4	□□□□□ -0.26
MRPL55-233	ENST00000495899	ANO9	A1A5B4	782 aa		13.39	□□□□□ -0.27

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