RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CBX1P83916 185 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 TFAMQ00059 246 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 HIC1Q14526 733 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 CCNI2Q6ZMN8 369 aaPredicted RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 GSPT2Q8IYD1 628 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 KRT222Q8N1A0 295 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 CPB2Q96IY4 423 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.594e-10■□□□□ 10
PRPF4B-209ENST00000494674 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 UVRAGQ9P2Y5 699 aa11.37□□□□□ -0.59
PRPF4B-209ENST00000494674 SCN1AP35498 2009 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 SCN10AQ9Y5Y9 1956 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 MBLAC1A4D2B0 266 aaPredicted RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 LACTBL1A8MY62 500 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 HAS3O00219 553 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 ZEB2O60315 1214 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 STAG3L1P0CL83 205 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 SMIM10L2BP0DMW5 78 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 MCM3P25205 808 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 ADAM17P78536 824 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 SLC7A5Q01650 507 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 C8orf74Q6P047 294 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 MON1BQ7L1V2 547 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 MCOLN2Q8IZK6 566 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 C1orf127Q8N9H9 656 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 AENQ8WTP8 325 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 KRT35Q92764 455 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 RPS6KC1Q96S38 1066 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 CARD9Q9H257 536 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 RPF1Q9H9Y2 349 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 STIM2Q9P246 746 aa11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
PRPF4B-209ENST00000494674 A0A1B0GUA9 196 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RRN3P2A6NIE6 340 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 GLI1P08151 1106 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 ITGA4P13612 1032 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 COMTP21964 271 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 GNA15P30679 374 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 PEX5P50542 639 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 PTP4A2Q12974 167 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 SLC10A6Q3KNW5 377 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 NAA35Q5VZE5 725 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 SMYD5Q6GMV2 418 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 LLGL2Q6P1M3 1020 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CPA5Q8WXQ8 436 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 KRT12Q99456 494 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 APBA2Q99767 749 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 SELENOOQ9BVL4 669 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 ZSCAN5CA6NGD5 496 aaPredicted RBP11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 MIF4GDA9UHW6 222 aaKnown RBP11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RAD51CO43502 376 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 GPR32O75388 356 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 TNNC2P02585 160 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CYP2B6P20813 491 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RRM1P23921 792 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RGS2P41220 211 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CRHR2Q13324 411 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 MESDQ14696 234 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CASP8Q14790 479 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 ZNF699Q32M78 642 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 JADE1Q6IE81 842 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RUFY4Q6ZNE9 571 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 HDXQ7Z353 690 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 ANKRD36BP1Q96IX9 119 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 AP1M1Q9BXS5 423 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 BCO2Q9BYV7 579 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 TRIM7Q9C029 511 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 GDF3Q9NR23 364 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 ST7Q9NRC1 585 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 CISHQ9NSE2 258 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 POLIQ9UNA4 740 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 NR2E1Q9Y466 385 aa11.35□□□□□ -0.59
PRPF4B-209ENST00000494674 NRCAMQ92823 1304 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms