RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 MFSD14BQ5SR56 506 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 KCNV1Q6PIU1 500 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 GADL1Q6ZQY3 521 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 OVCH2Q7RTZ1 564 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 TTC7BQ86TV6 843 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 DGKHQ86XP1 1220 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 XYLT1Q86Y38 959 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 DENND1CQ8IV53 801 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 OR52N2Q8NGI0 321 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 RGMAQ96B86 450 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 CEP95Q96GE4 821 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 DMRTA2Q96SC8 542 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 MYOCQ99972 504 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 CPEB1Q9BZB8 566 aaKnown RBP5.64□□□□□ -1.51
SMC4-224ENST00000494612 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 PRDM11Q9NQV5 511 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 C1orf112Q9NSG2 853 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 SLC52A1Q9NWF4 448 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 STAP2Q9UGK3 403 aa5.64□□□□□ -1.51
SMC4-224ENST00000494612 CFAP20Q9Y6A4 193 aaKnown RBP5.64□□□□□ -1.51
SMC4-224ENST00000494612 H3BUI4 141 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CAND2O75155 1236 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 RECQL4O94761 1208 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 SCAF4O95104 1147 aaKnown RBP5.63□□□□□ -1.51
SMC4-224ENST00000494612 CDK4P11802 303 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 HTR1BP28222 390 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CD38P28907 300 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CRHR1P34998 444 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CDC42EP1Q00587 391 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 TAP1Q03518 808 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 ANKS6Q68DC2 871 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CCDC149Q6ZUS6 474 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 MYEOVQ96EZ4 313 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 NT5C1BQ96P26 610 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 CPPED1Q9BRF8 314 aaPredicted RBP5.63□□□□□ -1.51
SMC4-224ENST00000494612 LRFN3Q9BTN0 628 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 TMEM140Q9NV12 185 aa5.63□□□□□ -1.51
SMC4-224ENST00000494612 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.63□□□□□ -1.51
SMC4-224ENST00000494612 CENPVL1A0A0U1RR11 272 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 GPR32O75388 356 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 GASTP01350 101 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 RPLP2P05387 115 aaKnown RBP5.62□□□□□ -1.51
SMC4-224ENST00000494612 ITGB6P18564 788 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 LAG3P18627 525 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 ALDH1A3P47895 512 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 GZMKP49863 264 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 RAP2BP61225 183 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 FAM189BP81408 668 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
SMC4-224ENST00000494612 SNAPC2Q13487 334 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 GALEQ14376 348 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 VPS72Q15906 364 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 TIGD2Q4W5G0 525 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 COBLL1Q53SF7 1204 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 EPHA10Q5JZY3 1008 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 HECTD2Q5U5R9 776 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 AFMIDQ63HM1 303 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 OLFML1Q6UWY5 402 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 NPNTQ6UXI9 565 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 HEATR3Q7Z4Q2 680 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 C3orf20Q8ND61 904 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 SLC35B2Q8TB61 432 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 KLHDC4Q8TBB5 520 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 NSUN6Q8TEA1 469 aaKnown RBP5.62□□□□□ -1.51
SMC4-224ENST00000494612 IL17RAQ96F46 866 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 LSM14BQ9BX40 385 aaKnown RBP5.62□□□□□ -1.51
SMC4-224ENST00000494612 SLC46A2Q9BY10 475 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 B3GNT5Q9BYG0 378 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 ABCF2Q9UG63 623 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 NISCHQ9Y2I1 1504 aa5.62□□□□□ -1.51
SMC4-224ENST00000494612 TMEM200CA6NKL6 621 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 ZAR1LA6NP61 321 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 H3BML4 177 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 NRP1O14786 923 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 TUSC2O75896 110 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 USP14P54578 494 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 NOGQ13253 232 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 GBX1Q14549 363 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 PDZD4Q76G19 769 aaPredicted RBP5.61□□□□□ -1.51
SMC4-224ENST00000494612 DAAM2Q86T65 1068 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 FAM83AQ86UY5 434 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 FAM156AQ8NDB6 213 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 BEND2Q8NDZ0 799 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 PLBD2Q8NHP8 589 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 IFI44Q8TCB0 444 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 MRGPRX4Q96LA9 322 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 BBC3Q96PG8 261 aaPredicted RBP5.61□□□□□ -1.51
SMC4-224ENST00000494612 NDC1Q9BTX1 674 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 SLAMF7Q9NQ25 335 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 LMBRD1Q9NUN5 540 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 STXBP5LQ9Y2K9 1186 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 PCDHGB6Q9Y5F9 930 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 PCDHA1Q9Y5I3 950 aa5.61□□□□□ -1.51
SMC4-224ENST00000494612 CCDC194A0A1B0GVG4 234 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 TCRBV7S2A1N4TA0A589 114 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 APAF1O14727 1248 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms