RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CALB1P05937 261 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PYGMP11217 842 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 CHRNB2P17787 502 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 FLT3P36888 993 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SCTRP47872 440 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 NPTX2P47972 431 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
RFC4-214ENST00000494047 KRT17Q04695 432 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PPIL2Q13356 520 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 ZNF211Q13398 564 aaPredicted RBP12.22□□□□□ -0.45
RFC4-214ENST00000494047 NEDD9Q14511 834 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PSMD6Q15008 389 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 ZNF568Q3ZCX4 644 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 FAM102BQ5T8I3 360 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PCGF5Q86SE9 256 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 TDRPQ86YL5 185 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 PSPC1Q8WXF1 523 aaKnown RBP12.22□□□□□ -0.45
RFC4-214ENST00000494047 CLEC4DQ8WXI8 215 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 GLG1Q92896 1179 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 KREMEN1Q96MU8 473 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 TRIM7Q9C029 511 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SLC40A1Q9NP59 571 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 HAUS2Q9NVX0 235 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 ANAPC7Q9UJX3 599 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SLC12A4Q9UP95 1085 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SIP14410 1827 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 MYPNQ86TC9 1320 aa12.22□□□□□ -0.45
RFC4-214ENST00000494047 SLC16A4O15374 487 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 CYP26A1O43174 497 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 CETPP11597 493 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 UNGP13051 313 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 TMOD1P28289 359 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 SNAPC2Q13487 334 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 ACVR2BQ13705 512 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 SIX1Q15475 284 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 ARHGEF16Q5VV41 709 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 CYB5D1Q6P9G0 228 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 RHBDF2Q6PJF5 856 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 MCOLN2Q8IZK6 566 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 FUKQ8N0W3 1084 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 CFAP61Q8NHU2 1237 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 DDX1Q92499 740 aaKnown RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 KRT35Q92764 455 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 KAT2BQ92831 832 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 ZKSCAN4Q969J2 545 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 SCLT1Q96NL6 688 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 RMDN3Q96TC7 470 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 MYCBPQ99417 103 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 PDCD2LQ9BRP1 358 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 PCIF1Q9H4Z3 704 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 FAM124BQ9H5Z6 455 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 PXMP2Q9NR77 195 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 DDX56Q9NY93 547 aaKnown RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 IP6K2Q9UHH9 426 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 SMG5Q9UPR3 1016 aaKnown RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 EFR3BQ9Y2G0 817 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 USP15Q9Y4E8 981 aaPredicted RBP12.21□□□□□ -0.45
RFC4-214ENST00000494047 STYXL1Q9Y6J8 313 aa12.21□□□□□ -0.45
RFC4-214ENST00000494047 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
RFC4-214ENST00000494047 WDR81Q562E7 1941 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 TMEM110-MUSTN1A8MSY1 372 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 BACH1O14867 736 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 TJP3O95049 919 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 CYP1A1P04798 512 aaPredicted RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 ADRB2P07550 413 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 RARAP10276 462 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 KRT5P13647 590 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 TSHRP16473 764 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 GJA5P36382 358 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 DLG4P78352 724 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 IL9RQ01113 521 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 AUHQ13825 339 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 XKR3Q5GH77 459 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 FBXW10Q5XX13 1052 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 MIS18BP1Q6P0N0 1132 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 SLC47A2Q86VL8 602 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 PALB2Q86YC2 1186 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 ARHGEF2Q92974 986 aaKnown RBP12.2□□□□□ -0.46
RFC4-214ENST00000494047 BICD1Q96G01 975 aa12.2□□□□□ -0.46
RFC4-214ENST00000494047 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms