RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 ZNF627Q7L945 461 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 TMEM132CQ8N3T6 1108 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 C3orf20Q8ND61 904 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 HPS3Q969F9 1004 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 MVB12AQ96EY5 273 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 COQ10AQ96MF6 247 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 PNKPQ96T60 521 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 PACSIN1Q9BY11 444 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 GTPBP4Q9BZE4 634 aaKnown RBP5.61□□□□□ -1.51
ITGB1-216ENST00000493758 WDCPQ9H6R7 721 aa5.61□□□□□ -1.51
ITGB1-216ENST00000493758 GNL3LQ9NVN8 582 aaKnown RBP5.61□□□□□ -1.51
ITGB1-216ENST00000493758 THRAP3Q9Y2W1 955 aaKnown RBP5.61□□□□□ -1.51
ITGB1-216ENST00000493758 F2RL2O00254 374 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
ITGB1-216ENST00000493758 PRSS23O95084 383 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 SBK3P0C264 359 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 PF4V1P10720 104 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 FCER1AP12319 257 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 CXADRP78310 365 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 GUCY1B3Q02153 619 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 PTPAQ15257 358 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 FLYWCH1Q4VC44 716 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 ABHD17BQ5VST6 288 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 FAM90A1Q86YD7 464 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 ANKRD13AQ8IZ07 590 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 NEU4Q8WWR8 484 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-216ENST00000493758 SERHL2Q9H4I8 314 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 GSTO2Q9H4Y5 243 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 KMT5AQ9NQR1 393 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 SYBUQ9NX95 663 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 RNF181Q9P0P0 153 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 ING1Q9UK53 422 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-216ENST00000493758 NEU2Q9Y3R4 380 aa5.6□□□□□ -1.51
ITGB1-216ENST00000493758 WDR33Q9C0J8 1336 aaKnown RBP5.59□□□□□ -1.51
ITGB1-216ENST00000493758 A0A1W2PS29 197 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 PIPSLA2A3N6 862 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 FOXN1O15353 648 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 B3GALT2O43825 422 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 LPXNO60711 386 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 ERN1O75460 977 aaKnown RBP5.59□□□□□ -1.51
ITGB1-216ENST00000493758 SPDEFO95238 335 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 NDUFA10O95299 355 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 FOSP01100 380 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-216ENST00000493758 EGR2P11161 476 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-216ENST00000493758 RAB27AP51159 221 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 NOMO3P69849 1222 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 POU6F2P78424 691 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-216ENST00000493758 SNAPC2Q13487 334 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 NOMO2Q5JPE7 1267 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 EMC10Q5UCC4 262 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 Q6YL49 198 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 CATIPQ7Z7H3 387 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 MRGPRGQ86SM5 289 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 Q8NA96 180 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 GALNT9Q9HCQ5 603 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 NMRK2Q9NPI5 230 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 HSFX1Q9UBD0 423 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 IP6K2Q9UHH9 426 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 ZDHHC8Q9ULC8 765 aa5.59□□□□□ -1.51
ITGB1-216ENST00000493758 CCDC78A2IDD5 438 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 GPANK1O95872 356 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 CHEK2O96017 543 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 U2AF1L5P0DN76 240 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 PRDX5P30044 214 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 ZEB1P37275 1124 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 U2AF1Q01081 240 aaKnown RBP eCLIP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 GTF2H3Q13889 308 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 NFE2Q16621 373 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 CYP2A13Q16696 494 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 SPDYE7PQ495Y7 208 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 KHDC1Q4VXA5 237 aaKnown RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 CCDC93Q567U6 631 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 NXNQ6DKJ4 435 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 CXorf57Q6NSI4 855 aaKnown RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 TMPRSS9Q7Z410 1059 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 AOPEPQ8N6M6 819 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 JPH3Q8WXH2 748 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 SCAMP4Q969E2 229 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 KLHL32Q96NJ5 620 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 MAP3K14Q99558 947 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 VRK1Q99986 396 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 ZSWIM1Q9BR11 485 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 TOR3AQ9H497 397 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 GPR35Q9HC97 309 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 CFAP97Q9P2B7 532 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 FEZ2Q9UHY8 353 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-216ENST00000493758 ZNF180Q9UJW8 692 aa5.58□□□□□ -1.52
ITGB1-216ENST00000493758 H3BML4 177 aa5.57□□□□□ -1.52
ITGB1-216ENST00000493758 OFD1O75665 1012 aa5.57□□□□□ -1.52
ITGB1-216ENST00000493758 RHOBTB3O94955 611 aa5.57□□□□□ -1.52
ITGB1-216ENST00000493758 FTLP02792 175 aaPredicted RBP5.57□□□□□ -1.52
ITGB1-216ENST00000493758 S100BP04271 92 aaPredicted RBP5.57□□□□□ -1.52
ITGB1-216ENST00000493758 AVPR1BP47901 424 aa5.57□□□□□ -1.52
ITGB1-216ENST00000493758 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms