RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 HSD3B7Q9H2F3 369 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 MMRN2Q9H8L6 949 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 TAB2Q9NYJ8 693 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 FAN1Q9Y2M0 1017 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 GRXCR2A6NFK2 248 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 FSCN2O14926 492 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 FAM189A1O60320 539 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 TBX10O75333 385 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 RECQL4O94761 1208 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 ALDH2P05091 517 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 GALTP07902 379 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 DLATP10515 647 aaKnown RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 SLC11A1P49279 550 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 VAMP7P51809 220 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 PPP2R3AQ06190 1150 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 DLX2Q07687 328 aaPredicted RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 BFSP1Q12934 665 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 GSE1Q14687 1217 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 KRT31Q15323 416 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 ENOX2Q16206 610 aaKnown RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 DUSP6Q16828 381 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 UVSSAQ2YD98 709 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 IGSF21Q96ID5 467 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 MFSD14AQ96MC6 490 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 GAD1Q99259 594 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 TOPORSQ9NS56 1045 aaPredicted RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 KLK14Q9P0G3 267 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 DNAJB4Q9UDY4 337 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 BARX2Q9UMQ3 279 aaPredicted RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 GIT1Q9Y2X7 761 aa14.52□□□□□ -0.09
MSH6-208ENST00000493177 PRG3Q9Y2Y8 225 aaPredicted RBP14.52□□□□□ -0.09
MSH6-208ENST00000493177 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.52□□□□□ -0.09
MSH6-208ENST00000493177 ARL5CA6NH57 179 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 LACTBL1A8MY62 500 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 IL18RAPO95256 599 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 CXCL14O95715 111 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 TRIM49P0CI25 452 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 TRIM49CP0CI26 452 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 TNNI1P19237 187 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 LTBRP36941 435 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 SCNN1GP51170 649 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 COPB1P53618 953 aaKnown RBP14.51□□□□□ -0.09
MSH6-208ENST00000493177 MARSP56192 900 aaKnown RBP14.51□□□□□ -0.09
MSH6-208ENST00000493177 FANCCQ00597 558 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 SMAD4Q13485 552 aaKnown RBP14.51□□□□□ -0.09
MSH6-208ENST00000493177 PSMD6Q15008 389 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 SURF1Q15526 300 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 CTC1Q2NKJ3 1217 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 FILIP1LQ4L180 1135 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 TMEM175Q9BSA9 504 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 TUBGCP2Q9BSJ2 902 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 VPS16Q9H269 839 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 PDE11AQ9HCR9 933 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 LIMA1Q9UHB6 759 aaKnown RBP14.51□□□□□ -0.09
MSH6-208ENST00000493177 TRANK1O15050 2925 aa14.51□□□□□ -0.09
MSH6-208ENST00000493177 HIDE1A8MVS5 230 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 NRP1O14786 923 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 MBTPS2O43462 519 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 STX10O60499 249 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 DDHD2O94830 711 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 COL19A1Q14993 1142 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 SLC10A6Q3KNW5 377 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 LMBRD2Q68DH5 695 aaPredicted RBP14.5□□□□□ -0.09
MSH6-208ENST00000493177 DDX53Q86TM3 631 aaKnown RBP14.5□□□□□ -0.09
MSH6-208ENST00000493177 TRIM59Q8IWR1 403 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 GJD3Q8N144 294 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 PLEKHO2Q8TD55 490 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 PARD3BQ8TEW8 1205 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 BORCS6Q96GS4 357 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 SNX27Q96L92 541 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 ZFP42Q96MM3 310 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 POP1Q99575 1024 aaKnown RBP14.5□□□□□ -0.09
MSH6-208ENST00000493177 CGRRF1Q99675 332 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 PLEKHA5Q9HAU0 1116 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 STK39Q9UEW8 545 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 UNC80Q8N2C7 3258 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 PRUNE2Q8WUY3 3088 aa14.5□□□□□ -0.09
MSH6-208ENST00000493177 BRWD1Q9NSI6 2320 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 TRIP11Q15643 1979 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 LRRIQ3A6PVS8 624 aaPredicted RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 AFPP02771 609 aaKnown RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 TMEM191BP0C7N4 346 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 AFF1P51825 1210 aaKnown RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 WNT7BP56706 349 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 DLG4P78352 724 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 TFAMQ00059 246 aaKnown RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 POU5F1Q01860 360 aaKnown RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 GRIK3Q13003 919 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 VWA3BQ502W6 1294 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 TMEM173Q86WV6 379 aaPredicted RBP14.49□□□□□ -0.09
MSH6-208ENST00000493177 CD302Q8IX05 232 aa14.49□□□□□ -0.09
MSH6-208ENST00000493177 AUTS2Q8WXX7 1259 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms