RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 FGFR3P22607 806 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 KLRC2P26717 231 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 TKTP29401 623 aaKnown RBP13.83□□□□□ -0.2
CLIP2-209ENST00000493166 MRPS5P82675 430 aaKnown RBP13.83□□□□□ -0.2
CLIP2-209ENST00000493166 CREMQ03060 361 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 CYP24A1Q07973 514 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 PSMD5Q16401 504 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 C9orf57Q5W0N0 161 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 ISM2Q6H9L7 571 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 PRSS55Q6UWB4 352 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-209ENST00000493166 PPFIBP1Q86W92 1011 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 GPR65Q8IYL9 337 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 ATXN2LQ8WWM7 1075 aaKnown RBP13.83□□□□□ -0.2
CLIP2-209ENST00000493166 KLHL5Q96PQ7 755 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
CLIP2-209ENST00000493166 HCFC2Q9Y5Z7 792 aa13.83□□□□□ -0.2
CLIP2-209ENST00000493166 PPEF2O14830 753 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 TEX28O15482 410 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 DLATP10515 647 aaKnown RBP13.82□□□□□ -0.2
CLIP2-209ENST00000493166 LTBRP36941 435 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 PRCPP42785 496 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 RBM10P98175 930 aaKnown RBP13.82□□□□□ -0.2
CLIP2-209ENST00000493166 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-209ENST00000493166 STIM1Q13586 685 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 MYBPC2Q14324 1141 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 PSMD6Q15008 389 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 CLUL1Q15846 466 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 CAMK4Q16566 473 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 COBLL1Q53SF7 1204 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 GLYCTKQ8IVS8 523 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 VN1R2Q8NFZ6 395 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 LNX1Q8TBB1 728 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-209ENST00000493166 TMEM174Q8WUU8 243 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 PIK3R5Q8WYR1 880 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 CASP10Q92851 521 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 ANKRD36BP1Q96IX9 119 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 MTMR12Q9C0I1 747 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 RXFP1Q9HBX9 757 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 DMAC2Q9NW81 257 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 FNIP2Q9P278 1114 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 TRAF3IP3Q9Y228 551 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 FRMD4BQ9Y2L6 1034 aa13.82□□□□□ -0.2
CLIP2-209ENST00000493166 VCANP13611 3396 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ANO9A1A5B4 782 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 BIN1O00499 593 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 PIRO00625 290 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 SYN3O14994 580 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 TNNC2P02585 160 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ITGB3P05106 788 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
CLIP2-209ENST00000493166 TNNI1P19237 187 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 PAX3P23760 479 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 NR2F2P24468 414 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 RPL13P26373 211 aaKnown RBP13.81□□□□□ -0.2
CLIP2-209ENST00000493166 CLCN4P51793 760 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 LILRA4P59901 499 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 KCNC3Q14003 757 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 NFIL3Q16649 462 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 DUOXA2Q1HG44 320 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 LEXMQ3ZCV2 418 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
CLIP2-209ENST00000493166 LMBRD2Q68DH5 695 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-209ENST00000493166 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 TMEM184AQ6ZMB5 413 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ANKS3Q6ZW76 656 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 C1orf127Q8N9H9 656 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 FAM84AQ96KN4 292 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ZNF560Q96MR9 790 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ASB2Q96Q27 587 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 CD207Q9UJ71 328 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 R3HCC1Q9Y3T6 440 aaKnown RBP13.81□□□□□ -0.2
CLIP2-209ENST00000493166 PTPRJQ12913 1337 aa13.81□□□□□ -0.2
CLIP2-209ENST00000493166 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 M0QZQ0 153 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 DLL1O00548 723 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 PSMA7O14818 248 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 GLUD1P00367 558 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 KRT19P08727 400 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 EPCAMP16422 314 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
CLIP2-209ENST00000493166 PPP1R2P41236 205 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 PNPLA4P41247 253 aa13.8□□□□□ -0.2
CLIP2-209ENST00000493166 AARSP49588 968 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLIP2-209ENST00000493166 CASP4P49662 377 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms