RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 RSAD1Q9HA92 442 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PLEKHA5Q9HAU0 1116 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 PRDM10Q9NQV6 1147 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 TMEM39AQ9NV64 488 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 TUBGCP4Q9UGJ1 667 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PUF60Q9UHX1 559 aaKnown RBP8.64□□□□□ -1.03
FDPS-218ENST00000492887 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 ITGA11Q9UKX5 1188 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 MYO6Q9UM54 1294 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 AGAP1Q9UPQ3 857 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 DERAQ9Y315 318 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 C2CD2Q9Y426 696 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 SQORQ9Y6N5 450 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 PCNTO95613 3336 aa8.64□□□□□ -1.03
FDPS-218ENST00000492887 UMODL1Q5DID0 1318 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 VWA8A3KMH1 1905 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 MAP3K13O43283 966 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 EVI5O60447 810 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 MGEA5O60502 916 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 CD4P01730 458 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 CCDC175P0C221 793 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 TNFAIP3P21580 790 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 CYP2C18P33260 490 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 EIF4A3P38919 411 aaKnown RBP8.63□□□□□ -1.03
FDPS-218ENST00000492887 KIF11P52732 1056 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 CUL2Q13617 745 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 C15orf39Q6ZRI6 1047 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 C1orf127Q8N9H9 656 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 ACRBPQ8NEB7 543 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 LMO3Q8TAP4 145 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 APBB2Q92870 758 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 FAM193BQ96PV7 902 aaPredicted RBP8.63□□□□□ -1.03
FDPS-218ENST00000492887 MMS19Q96T76 1030 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 GAD1Q99259 594 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 FTHL17Q9BXU8 183 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 SPTLC3Q9NUV7 552 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 PRKAG2Q9UGJ0 569 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 POLIQ9UNA4 740 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 GIT1Q9Y2X7 761 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 COQ4Q9Y3A0 265 aa8.63□□□□□ -1.03
FDPS-218ENST00000492887 PTPRDP23468 1912 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 NDUFA10O95299 355 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 PARNO95453 639 aaKnown RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 THP07101 528 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 PLEKP08567 350 aaPredicted RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 ATICP31939 592 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 RAP1GAPP47736 663 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TAF6P49848 677 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 SCNN1GP51170 649 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 JAM2P57087 298 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 CLDN10P78369 228 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 KRT83P78385 493 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 RNASELQ05823 741 aaKnown RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 LRRC26Q2I0M4 334 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 WDR72Q3MJ13 1102 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 SV2CQ496J9 727 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 ARHGAP29Q52LW3 1261 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TAF3Q5VWG9 929 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 E4F1Q66K89 784 aaPredicted RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 TMEM270Q6UE05 265 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 RAD9BQ6WBX8 426 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TOGARAM2Q6ZUX3 1019 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 ECHDC2Q86YB7 292 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TMEM139Q8IV31 216 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 CCDC170Q8IYT3 715 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 HELQQ8TDG4 1101 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TAF4BQ92750 862 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 C18orf25Q96B23 403 aaPredicted RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 HPDLQ96IR7 371 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 ARID3AQ99856 593 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 TMX1Q9H3N1 280 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 GOLGA2P5Q9HBQ8 144 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 APOBEC3GQ9HC16 384 aaKnown RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 UBN1Q9NPG3 1134 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 SLC38A7Q9NVC3 462 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 PLAGL2Q9UPG8 496 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 NUB1Q9Y5A7 615 aa8.62□□□□□ -1.03
FDPS-218ENST00000492887 BZW2Q9Y6E2 419 aaKnown RBP8.62□□□□□ -1.03
FDPS-218ENST00000492887 SMIM28A0A1B0GU29 152 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 SSU72P8A0A1W2PR75 194 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 FAM170AA1A519 330 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 CASTOR2A6NHX0 329 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 MEIS3P2A8K0S8 358 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 FOXN3O00409 490 aaPredicted RBP8.61□□□□□ -1.03
FDPS-218ENST00000492887 CYP26A1O43174 497 aa8.61□□□□□ -1.03
FDPS-218ENST00000492887 THAP12O43422 761 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms