RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 VWCEQ96DN2 955 aa23.71■■□□□ 1.39
PSPC1-204ENST00000492741 GOLGA2P5Q9HBQ8 144 aa23.71■■□□□ 1.39
PSPC1-204ENST00000492741 FBXL5Q9UKA1 691 aa23.71■■□□□ 1.39
PSPC1-204ENST00000492741 UPP2O95045 317 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 RFX1P22670 979 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 MFAP3P55082 362 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 FPGSQ05932 587 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 MYO1EQ12965 1108 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.7■■□□□ 1.39
PSPC1-204ENST00000492741 TC2NQ8N9U0 490 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 TRIM44Q96DX7 344 aaPredicted RBP23.7■■□□□ 1.39
PSPC1-204ENST00000492741 DAAM1Q9Y4D1 1078 aa23.7■■□□□ 1.39
PSPC1-204ENST00000492741 HOXA2O43364 376 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 EFCAB14O75071 495 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 ASS1P00966 412 aaKnown RBP23.7■■□□□ 1.38
PSPC1-204ENST00000492741 ATICP31939 592 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 SOX4Q06945 474 aaPredicted RBP23.7■■□□□ 1.38
PSPC1-204ENST00000492741 GRIK3Q13003 919 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 NOMO2Q5JPE7 1267 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 CLLU1OSQ5K130 101 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 NPAS4Q8IUM7 802 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 OR8K1Q8NGG5 319 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 TAF4BQ92750 862 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 HPDLQ96IR7 371 aa23.7■■□□□ 1.38
PSPC1-204ENST00000492741 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.7■■□□□ 1.38
PSPC1-204ENST00000492741 RNASELQ05823 741 aaKnown RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 ZNF667Q5HYK9 610 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 C9orf57Q5W0N0 161 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 FAM81BQ96LP2 452 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 STK33Q9BYT3 514 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 APOBEC3GQ9HC16 384 aaKnown RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 ABHD10Q9NUJ1 306 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 ZNHIT6Q9NWK9 470 aaKnown RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 KANSL3Q9P2N6 904 aa23.69■■□□□ 1.38
PSPC1-204ENST00000492741 NXF1Q9UBU9 619 aaKnown RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 AJAP1Q9UKB5 411 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 ZMYND8Q9ULU4 1186 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-204ENST00000492741 ALPK3Q96L96 1907 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 LRRC53A6NM62 1247 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 DRAP1Q14919 205 aaPredicted RBP23.68■■□□□ 1.38
PSPC1-204ENST00000492741 WDR72Q3MJ13 1102 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 OTOP2Q7RTS6 562 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 CXorf38Q8TB03 319 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 BAP1Q92560 729 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 NAA15Q9BXJ9 866 aaKnown RBP23.68■■□□□ 1.38
PSPC1-204ENST00000492741 XYLT2Q9H1B5 865 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 NUCKS1Q9H1E3 243 aaKnown RBP23.68■■□□□ 1.38
PSPC1-204ENST00000492741 NUB1Q9Y5A7 615 aa23.68■■□□□ 1.38
PSPC1-204ENST00000492741 FGBP02675 491 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 AMHP03971 560 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 TBXAS1P24557 533 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-204ENST00000492741 PDXDC1Q6P996 788 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 ENOSF1Q7L5Y1 443 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 LRRC8AQ8IWT6 810 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 FAM193BQ96PV7 902 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-204ENST00000492741 LBHD1Q9BQE6 289 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-204ENST00000492741 ANO9A1A5B4 782 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 CASTOR2A6NHX0 329 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 NRDCO43847 1150 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 P4HA1P13674 534 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 KCNJ6P48051 423 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 GCNT1Q02742 428 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 SFMBT2Q5VUG0 894 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 LRRC52Q8N7C0 313 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 KAT5Q92993 513 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 ZNF560Q96MR9 790 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 PANX2Q96RD6 677 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 NIF3L1Q9GZT8 377 aa23.67■■□□□ 1.38
PSPC1-204ENST00000492741 ZBBXA8MT70 800 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 PPEF2O14830 753 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 INPPL1O15357 1258 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 BAIAP3O94812 1187 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 LRPAP1P30533 357 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 USP8P40818 1118 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 STAT1P42224 750 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 CUL2Q13617 745 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 NAB2Q15742 525 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 GPIHBP1Q8IV16 184 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 ZNF830Q96NB3 372 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-204ENST00000492741 DNAJC7Q99615 494 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 MYO6Q9UM54 1294 aa23.66■■□□□ 1.38
PSPC1-204ENST00000492741 PIRO00625 290 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 PNPLA4P41247 253 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 GATMP50440 423 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 TNNC1P63316 161 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 ARID5AQ03989 594 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 TUSC3Q13454 348 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 SCARA5Q6ZMJ2 495 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 ZNF365Q70YC5 407 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 KREMEN1Q96MU8 473 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 MMS19Q96T76 1030 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 CACNG4Q9UBN1 327 aa23.65■■□□□ 1.38
PSPC1-204ENST00000492741 PDCD11Q14690 1871 aaKnown RBP23.65■■□□□ 1.38
PSPC1-204ENST00000492741 TBKBP1A7MCY6 615 aa23.64■■□□□ 1.38
PSPC1-204ENST00000492741 F8VZ95 297 aa23.64■■□□□ 1.38
PSPC1-204ENST00000492741 PODXLO00592 558 aa23.64■■□□□ 1.38
PSPC1-204ENST00000492741 RPL9P32969 192 aaKnown RBP23.64■■□□□ 1.38
PSPC1-204ENST00000492741 CLCNKBP51801 687 aa23.64■■□□□ 1.38
PSPC1-204ENST00000492741 JAM2P57087 298 aa23.64■■□□□ 1.38
PSPC1-204ENST00000492741 WDR5P61964 334 aaKnown RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms