RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 H7C4K7 107 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 OGTO15294 1046 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 TRAK2O60296 914 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ECI2O75521 394 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 PPP1R37O75864 691 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 SEC24AO95486 1093 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 VNN2O95498 520 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 RHOP08100 348 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CFHP08603 1231 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CXCL8P10145 99 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 PAX3P23760 479 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 TNFSF9P41273 254 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 GPC5P78333 572 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CACNB1Q02641 598 aaPredicted RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 MCM6Q14566 821 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ENOX2Q16206 610 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 SLC5A9Q2M3M2 681 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 PABPC1LQ4VXU2 614 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 SEZ6Q53EL9 994 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ZBTB41Q5SVQ8 909 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 USP49Q70CQ1 688 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 MTSS1LQ765P7 747 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 GET4Q7L5D6 327 aaPredicted RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CD302Q8IX05 232 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 APPL2Q8NEU8 664 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 GPR152Q8TDT2 470 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 DDX12PQ92771 950 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 INTS4Q96HW7 963 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CDK5RAP3Q96JB5 506 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 MFSD1Q9H3U5 465 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 PARVGQ9HBI0 331 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 TUBGCP4Q9UGJ1 667 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 AFF4Q9UHB7 1163 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 FBXO2Q9UK22 296 aaPredicted RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 CPSF3Q9UKF6 684 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 FBXL21Q9UKT6 434 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 MIA3Q5JRA6 1907 aa9.13□□□□□ -0.95
SMARCB1-207ENST00000491967 ANO9A1A5B4 782 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 LACTBL1A8MY62 500 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 PIRO00625 290 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 PTPN2P17706 415 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 TYMPP19971 482 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 PDCP20941 246 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 CTXN3Q4LDR2 81 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 SPATA1Q5VX52 437 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 ZNF720Q7Z2F6 126 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 TMEM130Q8N3G9 435 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 FLCNQ8NFG4 579 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 LRRC3Q9BY71 257 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 OSBPL6Q9BZF3 934 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 TBC1D17Q9HA65 648 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 ARHGEF3Q9NR81 526 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 FAM86C1Q9NVL1 165 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 CEP72Q9P209 647 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 HSFX1Q9UBD0 423 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 STK17AQ9UEE5 414 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 UBQLN1Q9UMX0 589 aaKnown RBP9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 DERAQ9Y315 318 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 NUB1Q9Y5A7 615 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 INSL5Q9Y5Q6 135 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 CLIC4Q9Y696 253 aa9.12□□□□□ -0.95
SMARCB1-207ENST00000491967 MYO15AQ9UKN7 3530 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 COL4A2P08572 1712 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 WDR87Q6ZQQ6 2873 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 GPR179Q6PRD1 2367 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 TSC2P49815 1807 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 NRG2O14511 850 aaPredicted RBP9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 HNRNPDLO14979 420 aaKnown RBP9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 MOSPD3O75425 235 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 CYP11A1P05108 521 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 GLULP15104 373 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SYT1P21579 422 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 FCARP24071 287 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 ADSSP30520 456 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 MCM4P33991 863 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 CCR2P41597 374 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 LIG4P49917 911 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 LILRA4P59901 499 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 PRKCQQ04759 706 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 PPP2R3AQ06190 1150 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 RESTQ13127 1097 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 GPR17Q13304 367 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 FZD5Q13467 585 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 MYBPC2Q14324 1141 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SLC39A14Q15043 492 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 ANGPT1Q15389 498 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 ZNF280DQ6N043 979 aa9.11□□□□□ -0.95
SMARCB1-207ENST00000491967 CRELD2Q6UXH1 353 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms