RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TOB2Q14106 344 aaPredicted RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 LRRC32Q14392 662 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 DHX8Q14562 1220 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ANKRD1Q15327 319 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 SYCP1Q15431 976 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 DNTTIP2Q5QJE6 756 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 VPS53Q5VIR6 699 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ATL3Q6DD88 541 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 IQSEC1Q6DN90 963 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ESRP1Q6NXG1 681 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 FOXR2Q6PJQ5 311 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 SPATA31D4Q6ZUB0 917 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 TAS1R1Q7RTX1 841 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 SMAP1Q8IYB5 467 aaPredicted RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ULK2Q8IYT8 1036 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 UBR7Q8N806 425 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 JMYQ8N9B5 988 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 MYRIPQ8NFW9 859 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 GPR150Q8NGU9 434 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 GPT2Q8TD30 523 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 STON2Q8WXE9 905 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 TFAP2CQ92754 450 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 NINJ1Q92982 152 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 RILPL2Q969X0 211 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 KIF1BPQ96EK5 621 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 RNPC3Q96LT9 517 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 NDC1Q9BTX1 674 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 GTPBP4Q9BZE4 634 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 MTFR1LQ9H019 292 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 USP44Q9H0E7 712 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 YTHDC2Q9H6S0 1430 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 KIAA1586Q9HCI6 787 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 TMEM260Q9NX78 707 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 USP36Q9P275 1121 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 USP25Q9UHP3 1055 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 FZD1Q9UP38 647 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP11BQ9Y2G3 1177 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 USP15Q9Y4E8 981 aaPredicted RBP2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 NOX1Q9Y5S8 564 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ABCA6Q8N139 1617 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 TTC21BQ7Z4L5 1316 aa2.38□□□□□ -2.03
SNRNP40-207ENST00000491106 ZC3H13Q5T200 1668 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 A0A1W2PP64 1363 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RTL1A6NKG5 1358 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ADGRB1O14514 1584 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ADGRB2O60241 1585 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 REREQ9P2R6 1566 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PTCH1Q13635 1447 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 NPATQ14207 1427 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 FAM135BQ49AJ0 1406 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SYCE3A1L190 88 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 FAM83GA6ND36 823 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 GOLGA6L4A6NEF3 574 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 UNC119BA6NIH7 251 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CTAGE5O15320 804 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 STX6O43752 255 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 NEMFO60524 1076 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ERN1O75460 977 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SURF6O75683 361 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ALDH1L1O75891 902 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 NCR1O76036 304 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ADCY5O95622 1261 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PTMAP06454 111 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC192P0DO97 292 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RAP2AP10114 183 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RBP3P10745 1247 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ZKSCAN1P17029 563 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SYT1P21579 422 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 LMO1P25800 156 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 AVPR1BP47901 424 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 AMPHP49418 695 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SCAND1P57086 179 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 GUCY1B3Q02153 619 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CHAF1AQ13111 956 aaPredicted RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MRPL49Q13405 166 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 DCTN1Q14203 1278 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 EIF4A2Q14240 407 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 NECTIN1Q15223 517 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 VPS72Q15906 364 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 MTHFSDQ2M296 383 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 HSP90AB2PQ58FF8 381 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CCDC183Q5T5S1 534 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 UTP14CQ5TAP6 766 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TAF3Q5VWG9 929 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 TSHZ3Q63HK5 1081 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 SLC4A10Q6U841 1118 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RUFY3Q7L099 469 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 G2E3Q7L622 706 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 KANSL1Q7Z3B3 1105 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 GDF7Q7Z4P5 450 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ERC1Q8IUD2 1116 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RPUSD2Q8IZ73 545 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CNTROBQ8N137 903 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 CLASRPQ8N2M8 674 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ZGPATQ8N5A5 531 aaKnown RBP2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF610Q8N9Z0 462 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 RNF169Q8NCN4 708 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 PIK3C3Q8NEB9 887 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 IL17REQ8NFR9 667 aa2.37□□□□□ -2.03
SNRNP40-207ENST00000491106 FBXO18Q8NFZ0 1043 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms