RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CTXN3Q4LDR2 81 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 BMP8AQ7Z5Y6 402 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 ASB7Q9H672 318 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 TMEM206Q9H813 350 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 PCDHB8Q9UN66 801 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 DERAQ9Y315 318 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 ARIH1Q9Y4X5 557 aaPredicted RBP18.95■□□□□ 0.62
SEC13-218ENST00000490283 STYXL1Q9Y6J8 313 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 C5orf42Q9H799 3197 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 CITO14578 2027 aa18.95■□□□□ 0.62
SEC13-218ENST00000490283 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 PPP1R37O75864 691 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 ADRB2P07550 413 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 PAX3P23760 479 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 POU5F1Q01860 360 aaKnown RBP18.94■□□□□ 0.62
SEC13-218ENST00000490283 ZBTB6Q15916 424 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 SPATA1Q5VX52 437 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 JADE1Q6IE81 842 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 SLC8B1Q6J4K2 584 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 DSTYKQ6XUX3 929 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 GET4Q7L5D6 327 aaPredicted RBP18.94■□□□□ 0.62
SEC13-218ENST00000490283 USP37Q86T82 979 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 PYM1Q9BRP8 204 aaKnown RBP18.94■□□□□ 0.62
SEC13-218ENST00000490283 OXCT2Q9BYC2 517 aaPredicted RBP18.94■□□□□ 0.62
SEC13-218ENST00000490283 IGSF9Q9P2J2 1179 aa18.94■□□□□ 0.62
SEC13-218ENST00000490283 FRMD3A2A2Y4 597 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 TISP43B9A030 160 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 TULP1O00294 542 aaPredicted RBP18.93■□□□□ 0.62
SEC13-218ENST00000490283 PRRG1O14668 218 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 CCL16O15467 120 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 IL18RAPO95256 599 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 LDHAP00338 332 aaKnown RBP18.93■□□□□ 0.62
SEC13-218ENST00000490283 FSHRP23945 695 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 ASIC1P78348 528 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 ROR1Q01973 937 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 YWHAHQ04917 246 aaPredicted RBP18.93■□□□□ 0.62
SEC13-218ENST00000490283 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 RSPO2Q6UXX9 243 aaPredicted RBP18.93■□□□□ 0.62
SEC13-218ENST00000490283 GRASPQ7Z6J2 395 aaPredicted RBP18.93■□□□□ 0.62
SEC13-218ENST00000490283 ZNF461Q8TAF7 563 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 STRA6Q9BX79 667 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 KBTBD4Q9NVX7 518 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 FBXL5Q9UKA1 691 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 C2CD2Q9Y426 696 aa18.93■□□□□ 0.62
SEC13-218ENST00000490283 LRG1P02750 347 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 NFICP08651 508 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 POU2F2P09086 479 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 CPB1P15086 417 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 TDGQ13569 410 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 E2F4Q16254 413 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 TPGS2Q68CL5 300 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 NXPE3Q969Y0 559 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 FAM122AQ96E09 287 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 TRIM9Q9C026 710 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 EPS15L1Q9UBC2 864 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 ZFP37Q9Y6Q3 630 aaPredicted RBP18.92■□□□□ 0.62
SEC13-218ENST00000490283 TRIP11Q15643 1979 aa18.92■□□□□ 0.62
SEC13-218ENST00000490283 M0QZQ0 153 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
SEC13-218ENST00000490283 ODC1P11926 461 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 GARTP22102 1010 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 GUCY2FP51841 1108 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 DNM1Q05193 864 aaKnown RBP18.91■□□□□ 0.62
SEC13-218ENST00000490283 PKP1Q13835 747 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 MRPL58Q14197 206 aaKnown RBP18.91■□□□□ 0.62
SEC13-218ENST00000490283 NT5DC4Q86YG4 428 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 FBXL6Q8N531 539 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 ASIC4Q96FT7 647 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 MYADMQ96S97 322 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 FAM213AQ9BRX8 229 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 KCNH6Q9H252 994 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 KCNK12Q9HB15 430 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 CYP4F11Q9HBI6 524 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 PCDHA7Q9UN72 937 aa18.91■□□□□ 0.62
SEC13-218ENST00000490283 DENND4AQ7Z401 1863 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 VWA8A3KMH1 1905 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 WDR27A2RRH5 827 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ABLIM3O94929 683 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ATF2P15336 505 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ADSSP30520 456 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 CASP5P51878 434 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 KCNA1Q09470 495 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 PABPC1LQ4VXU2 614 aaKnown RBP18.9■□□□□ 0.62
SEC13-218ENST00000490283 C9orf57Q5W0N0 161 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ARMCX5Q6P1M9 558 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ELMOD1Q8N336 334 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 NOC3LQ8WTT2 800 aaKnown RBP18.9■□□□□ 0.62
SEC13-218ENST00000490283 MFSD1Q9H3U5 465 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 MAFFQ9ULX9 164 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 ATP6V1DQ9Y5K8 247 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 MYH15Q9Y2K3 1946 aa18.9■□□□□ 0.62
SEC13-218ENST00000490283 OR6C75A6NL08 312 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 KIAA0391O15091 583 aaKnown RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 TBC1D4O60343 1298 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 N4BP1O75113 896 aaKnown RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 PRPF6O94906 941 aaKnown RBP18.89■□□□□ 0.61
SEC13-218ENST00000490283 LAMP2P13473 410 aa18.89■□□□□ 0.61
SEC13-218ENST00000490283 TYMPP19971 482 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms