RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
TFF3-203ENST00000489676 INSL6Q9Y581 213 aa11.76□□□□□ -0.53
TFF3-203ENST00000489676 PODXLO00592 558 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 TLL1O43897 1013 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 ZC3H11AO75152 810 aaKnown RBP eCLIP11.75□□□□□ -0.53
TFF3-203ENST00000489676 KIF4AO95239 1232 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 STAU1O95793 577 aaKnown RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 EFEMP2O95967 443 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 RPL9P32969 192 aaKnown RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 PBX1P40424 430 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 PIK3CAP42336 1068 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 SLC11A1P49279 550 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 CLCNKBP51801 687 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 RABGGTBP53611 331 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 RNASELQ05823 741 aaKnown RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 BIRC3Q13489 604 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 NCOA4Q13772 614 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 BTG3Q14201 252 aaPredicted RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 CREBRFQ8IUR6 639 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 ERGIC2Q96RQ1 377 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 GCNT4Q9P109 453 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
TFF3-203ENST00000489676 YBX2Q9Y2T7 364 aaKnown RBP11.75□□□□□ -0.53
TFF3-203ENST00000489676 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 SPTLC1O15269 473 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 TEX33O43247 280 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 SERPINC1P01008 464 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 ITGB1P05556 798 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 GALTP07902 379 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 MYOGP15173 224 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 PBX3P40426 434 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 MYL6P60660 151 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 RBP5P82980 135 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 KCNMA1Q12791 1236 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 NR1I3Q14994 352 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 TRIM65Q6PJ69 517 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
TFF3-203ENST00000489676 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 PBX4Q9BYU1 374 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 XPO4Q9C0E2 1151 aaKnown RBP11.74□□□□□ -0.53
TFF3-203ENST00000489676 INTS2Q9H0H0 1204 aaKnown RBP11.74□□□□□ -0.53
TFF3-203ENST00000489676 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
TFF3-203ENST00000489676 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 RAB20Q9NX57 234 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 IFNKQ9P0W0 207 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 PCDHA11Q9Y5I1 949 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 VWA8A3KMH1 1905 aa11.74□□□□□ -0.53
TFF3-203ENST00000489676 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.73□□□□□ -0.53
TFF3-203ENST00000489676 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.73□□□□□ -0.53
TFF3-203ENST00000489676 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 NRP1O14786 923 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PHACTR2O75167 634 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 TPM2P07951 284 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 LAG3P18627 525 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PON1P27169 355 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 ATICP31939 592 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PBX2P40425 430 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PNPLA4P41247 253 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 BCAR1P56945 870 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 UBASH3AP57075 661 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 LILRA4P59901 499 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 NOP14P78316 857 aaKnown RBP11.73□□□□□ -0.53
TFF3-203ENST00000489676 UBXN1Q04323 297 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 LIMS2Q7Z4I7 341 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 SPRED2Q7Z698 418 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
TFF3-203ENST00000489676 SLC39A11Q8N1S5 342 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 FIBCD1Q8N539 461 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 COLGALT1Q8NBJ5 622 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 RABGGTAQ92696 567 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 ZNF560Q96MR9 790 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 CRACR2AQ9BSW2 395 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PI4K2AQ9BTU6 479 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PLXNA4Q9HCM2 1894 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
TFF3-203ENST00000489676 PRG3Q9Y2Y8 225 aaPredicted RBP11.73□□□□□ -0.53
TFF3-203ENST00000489676 COL4A4P53420 1690 aaPredicted RBP11.72□□□□□ -0.53
TFF3-203ENST00000489676 CARNS1A5YM72 827 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 GOLGA6L3A6NEY3 463 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
TFF3-203ENST00000489676 PES1O00541 588 aaKnown RBP11.72□□□□□ -0.53
TFF3-203ENST00000489676 EPHB6O15197 1021 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 B3GAT3O94766 335 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 CA3P07451 260 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 KRT19P08727 400 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 SLC9A1P19634 815 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 ASPAP45381 313 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 OR1G1P47890 313 aa11.72□□□□□ -0.53
TFF3-203ENST00000489676 TAF6P49848 677 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms