RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GSDMDP57764 484 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 POLR2FP61218 127 aaKnown RBP17.23■□□□□ 0.35
CLDN11-208ENST00000488989 WDR5P61964 334 aaKnown RBP17.23■□□□□ 0.35
CLDN11-208ENST00000488989 NOP14P78316 857 aaKnown RBP17.23■□□□□ 0.35
CLDN11-208ENST00000488989 ZBED6P86452 979 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 GCNT1Q02742 428 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 DSC1Q08554 894 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 TMEM240Q5SV17 173 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 IQCEQ6IPM2 695 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 PSRC1Q6PGN9 363 aaPredicted RBP17.23■□□□□ 0.35
CLDN11-208ENST00000488989 ARHGEF19Q8IW93 802 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 TMEM130Q8N3G9 435 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 URGCPQ8TCY9 931 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 TATDN2Q93075 761 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 IMPG2Q9BZV3 1241 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
CLDN11-208ENST00000488989 MYO6Q9UM54 1294 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 AGAP1Q9UPQ3 857 aa17.23■□□□□ 0.35
CLDN11-208ENST00000488989 AKR1B15C9JRZ8 316 aaPredicted RBP17.22■□□□□ 0.35
CLDN11-208ENST00000488989 MFAP3LO75121 409 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 AMHP03971 560 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 KRT19P08727 400 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 RPL9P32969 192 aaKnown RBP17.22■□□□□ 0.35
CLDN11-208ENST00000488989 EPHB4P54760 987 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 JAM2P57087 298 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 TUSC3Q13454 348 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 ZNF699Q32M78 642 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 ENOSF1Q7L5Y1 443 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 CNGA4Q8IV77 575 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 DPF3Q92784 378 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 UROC1Q96N76 676 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 STK33Q9BYT3 514 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 GOLGA2P5Q9HBQ8 144 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 DNAJC12Q9UKB3 198 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
CLDN11-208ENST00000488989 INPP5FQ9Y2H2 1132 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 LUC7L2Q9Y383 392 aaKnown RBP17.22■□□□□ 0.35
CLDN11-208ENST00000488989 NUB1Q9Y5A7 615 aa17.22■□□□□ 0.35
CLDN11-208ENST00000488989 PPEF2O14830 753 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 DGKIO75912 1065 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 POMCP01189 267 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 SYN1P17600 705 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 KRT9P35527 623 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 PNPLA4P41247 253 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 DEFB103AP81534 67 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 LRMPQ12912 555 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 SPOPLQ6IQ16 392 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 PDXDC1Q6P996 788 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 CACNA2D4Q7Z3S7 1137 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 ABI1Q8IZP0 508 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 ZNF397Q8NF99 534 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 HERVK_113Q902F9 699 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 ZNF689Q96CS4 500 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 HPDLQ96IR7 371 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 ZNF560Q96MR9 790 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 KREMEN1Q96MU8 473 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 MRPL9Q9BYD2 267 aaKnown RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 GPR88Q9GZN0 384 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 NIF3L1Q9GZT8 377 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 NUCKS1Q9H1E3 243 aaKnown RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 FAM124BQ9H5Z6 455 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 UBE2TQ9NPD8 197 aaPredicted RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 NLRC4Q9NPP4 1024 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
CLDN11-208ENST00000488989 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
CLDN11-208ENST00000488989 DDHD2O94830 711 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 FECHP22830 423 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 PAX3P23760 479 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 HNRNPH3P31942 346 aaKnown RBP17.2■□□□□ 0.34
CLDN11-208ENST00000488989 MFAP3P55082 362 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 MYO1EQ12965 1108 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 CUL2Q13617 745 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 UPP1Q16831 310 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 ZNF667Q5HYK9 610 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 OTOP2Q7RTS6 562 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 COLGALT2Q8IYK4 626 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 PPM1KQ8N3J5 372 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 UBR7Q8N806 425 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 CPLX3Q8WVH0 158 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
CLDN11-208ENST00000488989 KAT5Q92993 513 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDN11-208ENST00000488989 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 GDAP2Q9NXN4 497 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 NR2E3Q9Y5X4 410 aa17.2■□□□□ 0.34
CLDN11-208ENST00000488989 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
CLDN11-208ENST00000488989 PODXLO00592 558 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms