RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, human

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL16A1-215	ENST00000488897	OLIG1	Q8TAK6	271 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	MYCBPAP	Q8TBZ2	947 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	DMAC2	Q9NW81	257 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	KCND2	Q9NZV8	630 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	TTI1	O43156	1089 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	FGG	P02679	453 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	POLG	P54098	1239 aa	Predicted RBP	19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	ICE2	Q659A1	982 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	EFCAB12	Q6NXP0	572 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	TNS4	Q8IZW8	715 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	C3orf20	Q8ND61	904 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	SYT11	Q9BT88	431 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	RAB17	Q9H0T7	212 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	CDHR5	Q9HBB8	845 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	OSGEP	Q9NPF4	335 aa		19.61	■□□□□ 0.73
COL16A1-215	ENST00000488897	SCN10A	Q9Y5Y9	1956 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	B4GALT4	O60513	344 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	TNFAIP3	P21580	790 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	ZNF131	P52739	623 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	POU5F1	Q01860	360 aa	Known RBP	19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	SPDYC	Q5MJ68	293 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	MMS22L	Q6ZRQ5	1243 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	TMC3	Q7Z5M5	1100 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	FAM178B	Q8IXR5	827 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	DNAJB3	Q8WWF6	145 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	BSND	Q8WZ55	320 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	CARD9	Q9H257	536 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	APEX2	Q9UBZ4	518 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	ODF2L	Q9ULJ1	636 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	DDX3Y	O15523	660 aa	Known RBP	19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	HBP1	O60381	514 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	CTSH	P09668	335 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	MTHFD1L	Q6UB35	978 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	DAW1	Q8N136	415 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	OR2W6P	Q8NHA6	318 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	INTS2	Q9H0H0	1204 aa	Known RBP	19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	PHF24	Q9UPV7	400 aa		19.6	■□□□□ 0.73
COL16A1-215	ENST00000488897	CEP290	O15078	2479 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897		E7EVH7	732 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	MYO1F	O00160	1098 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	C22orf31	O95567	290 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	RFX1	P22670	979 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	SEC24C	P53992	1094 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	NKX3-2	P78367	333 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	LRRC26	Q2I0M4	334 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	TRIM60	Q495X7	471 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	OTUD6A	Q7L8S5	288 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	SUGP1	Q8IWZ8	645 aa	Known RBP	19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	FIZ1	Q96SL8	496 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	NIFK	Q9BYG3	293 aa	Known RBP	19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	AGPAT3	Q9NRZ7	376 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	ATP11B	Q9Y2G3	1177 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	GOLGA6L10	A0A0M3HER8	536 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	ANKRD62	A6NC57	917 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	HIP1R	O75146	1068 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	CAPN15	O75808	1086 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	FLT3	P36888	993 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	PTEN	P60484	403 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	EMC2	Q15006	297 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	ODF2	Q5BJF6	829 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	NEK9	Q8TD19	979 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	GPR88	Q9GZN0	384 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	GTF2IRD1	Q9UHL9	959 aa		19.59	■□□□□ 0.73
COL16A1-215	ENST00000488897	C17orf102	A2RUQ5	167 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	MOXD2P	A6NHM9	499 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	LYPLA2	O95372	231 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	CYP2J2	P51589	502 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	DHX9	Q08211	1270 aa	Known RBP	19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	CBWD6	Q4V339	395 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	CBWD3	Q5JTY5	395 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	CBWD5	Q5RIA9	395 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	CELF4	Q9BZC1	486 aa	Known RBP	19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	BCCIP	Q9P287	314 aa	Known RBP eCLIP	19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	SLC12A6	Q9UHW9	1150 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	UMODL1	Q5DID0	1318 aa		19.58	■□□□□ 0.72
COL16A1-215	ENST00000488897	FSBP	O95073	299 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	SRGAP2C	P0DJJ0	459 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	ABCB4	P21439	1286 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	EIF3B	P55884	814 aa	Known RBP	19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	PPP2R2A	P63151	447 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	MYL7	Q01449	175 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	MYBPC2	Q14324	1141 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	SLC39A5	Q6ZMH5	540 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	RHPN2	Q8IUC4	686 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	SLC9A9	Q8IVB4	645 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	PPAN	Q9NQ55	473 aa	Known RBP	19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	GMNC	A6NCL1	334 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	FGFR4	P22455	802 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	KIZ	Q2M2Z5	673 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	ODR4	Q5SWX8	454 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	ASAP3	Q8TDY4	903 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	DPH5	Q9H2P9	285 aa		19.57	■□□□□ 0.72
COL16A1-215	ENST00000488897	FAM187A	A6NFU0	413 aa		19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	PPFIA2	O75334	1257 aa		19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	ADAM17	P78536	824 aa		19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	MAPK7	Q13164	816 aa		19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	PRPF4B	Q13523	1007 aa	Known RBP	19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	RHOT2	Q8IXI1	618 aa		19.56	■□□□□ 0.72
COL16A1-215	ENST00000488897	PRPF31	Q8WWY3	499 aa	Known RBP	19.56	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms