RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 C5orf60A6NFR6 353 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 MMP13P45452 471 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 GMPSP49915 693 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 GTF2A1P52655 376 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 NRLP54845 237 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 GCNT1Q02742 428 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 CALCOCO2Q13137 446 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF317Q96PQ6 595 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ABCF3Q9NUQ8 709 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 SLC9A2Q9UBY0 812 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF214Q9UL59 606 aaPredicted RBP13.5□□□□□ -0.25
CLIC4-202ENST00000488683 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
CLIC4-202ENST00000488683 GOLGA8SH3BPF8 625 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 GOLGA8MH3BSY2 632 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 FSCN2O14926 492 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 THAP12O43422 761 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 FSBPO95073 299 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 FASTKD3Q14CZ7 662 aaKnown RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 TMEM63BQ5T3F8 832 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 CYP4A22Q5TCH4 519 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 MICALCLQ6ZW33 695 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 DDX27Q96GQ7 796 aaKnown RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 FGFR1OP2Q9NVK5 253 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 AGO2Q9UKV8 859 aaKnown RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
CLIC4-202ENST00000488683 DGAT1O75907 488 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 RARGP13631 454 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 IVDP26440 423 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 GTF2H1P32780 548 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 SCTRP47872 440 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 BACE1P56817 501 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 GAD2Q05329 585 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 EMC2Q15006 297 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 CNPY4Q8N129 248 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 ATP6V0A1Q93050 837 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
CLIC4-202ENST00000488683 GARTP22102 1010 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 RXRBP28702 533 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 GNA15P30679 374 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 DYNLT1P63172 113 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF568Q3ZCX4 644 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 RDM1Q8NG50 284 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 DYDC1Q8WWB3 177 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ARHGEF2Q92974 986 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 PAIP2Q9BPZ3 127 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ATP6V0A4Q9HBG4 840 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ADAM22Q9P0K1 906 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TMEM120BA0PK00 339 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TCP11X1B4DZS4 312 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 F8VP50 259 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 PIK3R2O00459 728 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SPAG7O75391 227 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 WEE2P0C1S8 567 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 GLRA2P23416 452 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 CNGA2Q16280 664 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SMTNL2Q2TAL5 461 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ZACNQ401N2 412 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 JDP2Q8WYK2 163 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 DCLK3Q9C098 648 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 CNOT10Q9H9A5 744 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 C17orf75Q9HAS0 396 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 GGA2Q9UJY4 613 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 C4BPAP04003 597 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 PSAPP07602 524 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 FDX1P10109 184 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ACO1P21399 889 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 E2F5Q15329 346 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TNFAIP8L3Q5GJ75 292 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 RHBDF2Q6PJF5 856 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SRRM1Q8IYB3 904 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 NSUN6Q8TEA1 469 aaKnown RBP13.48□□□□□ -0.25
CLIC4-202ENST00000488683 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
CLIC4-202ENST00000488683 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms