RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TUBA3EQ6PEY2 450 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 CCDC174Q6PII3 467 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 LDHAL6AQ6ZMR3 332 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 RANBP9Q96S59 729 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 NUP88Q99567 741 aaPredicted RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 MYL10Q9BUA6 226 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 PDGFDQ9GZP0 370 aaPredicted RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 MTRF1LQ9UGC7 380 aaKnown RBP6.71□□□□□ -1.33
SIK3-212ENST00000488337 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 FBXL5Q9UKA1 691 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 KDM3AQ9Y4C1 1321 aa6.71□□□□□ -1.33
SIK3-212ENST00000488337 BTBD18B2RXH4 712 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 RHOBTB3O94955 611 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 PHBP35232 272 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 ZAP70P43403 619 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 STT3AP46977 705 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 KPNA1P52294 538 aaPredicted RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 KRT83P78385 493 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 EFTUD2Q15029 972 aaKnown RBP eCLIP6.71□□□□□ -1.34
SIK3-212ENST00000488337 TMEM266Q2M3C6 531 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 ODF2Q5BJF6 829 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TMCO4Q5TGY1 634 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 APOA5Q6Q788 366 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 PCGF5Q86SE9 256 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 MAML1Q92585 1016 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TTC9Q92623 222 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 DCAF5Q96JK2 942 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 FAR2Q96K12 515 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TMEM87BQ96K49 555 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 CADM1Q9BY67 442 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 PALMDQ9NP74 551 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 RIC8AQ9NPQ8 531 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 FGFR1OP2Q9NVK5 253 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TRNAU1APQ9NX07 287 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 NRXN3Q9Y4C0 1643 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 KDM4FA0A1W2PPD8 638 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 MACROD2A1Z1Q3 448 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 RAD51CO43502 376 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 MOGSQ13724 837 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 HLTFQ14527 1009 aaKnown RBP eCLIP6.71□□□□□ -1.34
SIK3-212ENST00000488337 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 NFE2Q16621 373 aaPredicted RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 TIGD2Q4W5G0 525 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 RWDD4Q6NW29 188 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 POTEHQ6S545 545 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 METTL2AQ96IZ6 378 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 CDHR1Q96JP9 859 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 ACAP3Q96P50 834 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 ZNF287Q9HBT7 754 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 SERTAD1Q9UHV2 236 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 AGO2Q9UKV8 859 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 CDH7Q9ULB5 785 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 PALLDQ8WX93 1383 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 CCDC194A0A1B0GVG4 234 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 FADS2P1A8MWK0 482 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 B8ZZF3 427 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 FOXN1O15353 648 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 SEC24DO94855 1032 aaPredicted RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 ALX3O95076 343 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 STARD3NLO95772 234 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 PAHP00439 452 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 RARGP13631 454 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 BMPR1AP36894 532 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 IGBP1P78318 339 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 GNA13Q14344 377 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 KLHL38Q2WGJ6 581 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 KIAA1841Q6NSI8 718 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 BEND5Q7L4P6 421 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 CEP70Q8NHQ1 597 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 ZC3H15Q8WU90 426 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 ZFPM2Q8WW38 1151 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 DDX17Q92841 729 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 CLSTN3Q9BQT9 956 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 PUS7LQ9H0K6 701 aaKnown RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 SERHL2Q9H4I8 314 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 EPB41L4AQ9HCS5 686 aaPredicted RBP6.71□□□□□ -1.34
SIK3-212ENST00000488337 CD93Q9NPY3 652 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TFCP2L1Q9NZI6 479 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 HACD3Q9P035 362 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 TACC3Q9Y6A5 838 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 WASF2Q9Y6W5 498 aa6.71□□□□□ -1.34
SIK3-212ENST00000488337 NDC80O14777 642 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 APBA3O96018 575 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 GSTM1P09488 218 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 TFPTP0C1Z6 253 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 PTPN4P29074 926 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 SP140Q13342 867 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 MTFR1Q15390 333 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 LONRF1Q17RB8 773 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 IZUMO2Q6UXV1 221 aa6.7□□□□□ -1.34
SIK3-212ENST00000488337 CYP4V2Q6ZWL3 525 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms