RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZC3H10Q96K80 434 aaKnown RBP10.22□□□□□ -0.77
COL17A1-207ENST00000488320 FAM20AQ96MK3 541 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 UROC1Q96N76 676 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
COL17A1-207ENST00000488320 NFKBIZQ9BYH8 718 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 TMEM9BQ9NQ34 198 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 SH3GLB2Q9NR46 395 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 VAV3Q9UKW4 847 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 WASF3Q9UPY6 502 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 INSL5Q9Y5Q6 135 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ZFYVE26Q68DK2 2539 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ZZEF1O43149 2961 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 EIF4E1BA6NMX2 242 aaKnown RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 TMEM189-UBE2V1I3L0A0 370 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 KHNYNO15037 678 aaKnown RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 SLC37A4O43826 429 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 MOSPD3O75425 235 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 ZIC2O95409 532 aaPredicted RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 SEC24BO95487 1268 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 PRKCBP05771 671 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 LIG1P18858 919 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 CSRP1P21291 193 aaKnown RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 CCINQ13939 588 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 KRT32Q14532 448 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 INF2Q27J81 1249 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 ADCK5Q3MIX3 580 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 ARHGAP29Q52LW3 1261 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 GLRA4Q5JXX5 417 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 SLC8B1Q6J4K2 584 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 Q6ZUG5 572 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 ZFYVE19Q96K21 471 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 PRIMPOLQ96LW4 560 aa10.21□□□□□ -0.77
COL17A1-207ENST00000488320 POLR3FQ9H1D9 316 aaPredicted RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 DUSP15Q9H1R2 295 aaPredicted RBP10.21□□□□□ -0.77
COL17A1-207ENST00000488320 ARID2Q68CP9 1835 aa10.21□□□□□ -0.78
COL17A1-207ENST00000488320 A0A1W2PRU2 124 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 NCANO14594 1321 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 HYAL3O43820 417 aaPredicted RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 CCNT1O60563 726 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 SLITRK3O94933 977 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 BAG4O95429 457 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 GBP1P32455 592 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 RDXP35241 583 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 ADAMTS20P59510 1910 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 CCT2P78371 535 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 FCHO2Q0JRZ9 810 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 PRPF4BQ13523 1007 aaKnown RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 PTPAQ15257 358 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 TRIP11Q15643 1979 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 UPP1Q16831 310 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 CTXN3Q4LDR2 81 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 TPGS2Q68CL5 300 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 PKN3Q6P5Z2 889 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 C19orf48Q6RUI8 117 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 ARID3BQ8IVW6 561 aaPredicted RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 CAMKK1Q8N5S9 505 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 DEFB124Q8NES8 71 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 SHKBP1Q8TBC3 707 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 BRF1Q92994 677 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 RSPRY1Q96DX4 576 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 TMEM209Q96SK2 561 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 SLC32A1Q9H598 525 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 PDZD7Q9H5P4 517 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 GOLGA2P5Q9HBQ8 144 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 ANKEF1Q9NU02 776 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 CEP72Q9P209 647 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 KIF26AQ9ULI4 1882 aaPredicted RBP10.2□□□□□ -0.78
COL17A1-207ENST00000488320 NEUROG3Q9Y4Z2 214 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 NUB1Q9Y5A7 615 aa10.2□□□□□ -0.78
COL17A1-207ENST00000488320 BCLAF3A2AJT9 711 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 DCLK1O15075 740 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 CPA1P15085 419 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 IFNAR1P17181 557 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 SSRP1Q08945 709 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 GRSF1Q12849 480 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 KARSQ15046 597 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 MAPK6Q16659 721 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 CD300LGQ6UXG3 332 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 TRIM22Q8IYM9 498 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 PPP1R10Q96QC0 940 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 FZD8Q9H461 694 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 KCNMB3Q9NPA1 279 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 THG1LQ9NWX6 298 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 AFF4Q9UHB7 1163 aaKnown RBP10.19□□□□□ -0.78
COL17A1-207ENST00000488320 FBXL5Q9UKA1 691 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 MSRB2Q9Y3D2 182 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 EML5Q05BV3 1969 aa10.19□□□□□ -0.78
COL17A1-207ENST00000488320 IGF2RP11717 2491 aa10.18□□□□□ -0.78
COL17A1-207ENST00000488320 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
COL17A1-207ENST00000488320 LNP1A1A4G5 178 aa10.18□□□□□ -0.78
COL17A1-207ENST00000488320 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms