RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 SLAMF7Q9NQ25 335 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 DDX56Q9NY93 547 aaKnown RBP6.2□□□□□ -1.42
VPS8-224ENST00000488255 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 HSFX1Q9UBD0 423 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 PCDHA3Q9Y5H8 950 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 DMRT1Q9Y5R6 373 aa6.2□□□□□ -1.42
VPS8-224ENST00000488255 CFAP20Q9Y6A4 193 aaKnown RBP6.2□□□□□ -1.42
VPS8-224ENST00000488255 ALDH1L1O75891 902 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 GCP02774 474 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 FCER1AP12319 257 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 NCLP19338 710 aaKnown RBP6.19□□□□□ -1.42
VPS8-224ENST00000488255 DSC2Q02487 901 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 FLYWCH1Q4VC44 716 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 SUPT20HQ8NEM7 779 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 GPR150Q8NGU9 434 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 NSUN6Q8TEA1 469 aaKnown RBP6.19□□□□□ -1.42
VPS8-224ENST00000488255 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 IMPG2Q9BZV3 1241 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 MAN1C1Q9NR34 630 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 DKK2Q9UBU2 259 aa6.19□□□□□ -1.42
VPS8-224ENST00000488255 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
VPS8-224ENST00000488255 GRID2IPA4D2P6 1211 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 MARCH11A6NNE9 402 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 DTNBO60941 627 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 PDGFRBP09619 1106 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 PF4V1P10720 104 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 MALP21145 153 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 FXR1P51114 621 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS8-224ENST00000488255 SNAPC2Q13487 334 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 Q6YL49 198 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 SLC44A3Q8N4M1 653 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 SLC17A8Q8NDX2 589 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 NSUN7Q8NE18 718 aaKnown RBP6.18□□□□□ -1.42
VPS8-224ENST00000488255 NACC2Q96BF6 587 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 AGAP2Q99490 1192 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 CALCOCO1Q9P1Z2 691 aa6.18□□□□□ -1.42
VPS8-224ENST00000488255 COL4A3Q01955 1670 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 PIPSLA2A3N6 862 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 FTLP02792 175 aaPredicted RBP6.17□□□□□ -1.42
VPS8-224ENST00000488255 PHKA1P46020 1223 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 TTF1Q15361 905 aaPredicted RBP6.17□□□□□ -1.42
VPS8-224ENST00000488255 GEN1Q17RS7 908 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 CCDC157Q569K6 752 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 TMEM240Q5SV17 173 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 SLC4A10Q6U841 1118 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 GPR149Q86SP6 731 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 C3orf20Q8ND61 904 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 IL17RDQ8NFM7 739 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 KLHL32Q96NJ5 620 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 GTPBP4Q9BZE4 634 aaKnown RBP6.17□□□□□ -1.42
VPS8-224ENST00000488255 SLITRK6Q9H5Y7 841 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 JKAMPQ9P055 326 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 KCNE5Q9UJ90 142 aa6.17□□□□□ -1.42
VPS8-224ENST00000488255 F2RL2O00254 374 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 SLC43A1O75387 559 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 POU2F2P09086 479 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 PLA2G5P39877 138 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
VPS8-224ENST00000488255 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 CCDC93Q567U6 631 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 ARMC6Q6NXE6 501 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 USP45Q70EL2 814 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 ZNF365Q70YC5 407 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 FAM43AQ8N2R8 423 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 AOPEPQ8N6M6 819 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 TMIEQ8NEW7 156 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 RGMAQ96B86 450 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 Q96MF0 132 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 C1orf43Q9BWL3 253 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 CASS4Q9NQ75 786 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 TBCCD1Q9NVR7 557 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 ABCF2Q9UG63 623 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 PACSIN3Q9UKS6 424 aa6.16□□□□□ -1.42
VPS8-224ENST00000488255 SUV39H1O43463 412 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 ZFPL1O95159 310 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 HKR1P10072 659 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 EGR2P11161 476 aaPredicted RBP6.15□□□□□ -1.42
VPS8-224ENST00000488255 AVPR1BP47901 424 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 ZNF844Q08AG5 666 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 ABHD17BQ5VST6 288 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 TMEM125Q96AQ2 219 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 PTCD3Q96EY7 689 aaKnown RBP6.15□□□□□ -1.42
VPS8-224ENST00000488255 BOD1Q96IK1 185 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 LRGUKQ96M69 825 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 ANKRD6Q9Y2G4 727 aa6.15□□□□□ -1.42
VPS8-224ENST00000488255 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 ZNF785A8K8V0 405 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 TOR1BO14657 336 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 GNAI3P08754 354 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 GNAI1P63096 354 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 MCL1Q07820 350 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 NOGQ13253 232 aa6.14□□□□□ -1.43
VPS8-224ENST00000488255 PGS1Q32NB8 556 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms