RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NPNTQ6UXI9 565 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 SPATA31D4Q6ZUB0 917 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 CCDC149Q6ZUS6 474 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 PPP1R3BQ86XI6 285 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 DGKHQ86XP1 1220 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 TMPRSS6Q8IU80 811 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 CCAR1Q8IX12 1150 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 TIFAQ96CG3 184 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 DCLRE1CQ96SD1 692 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 GPR20Q99678 358 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 LRFN3Q9BTN0 628 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 TMEM60Q9H2L4 133 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 BRD9Q9H8M2 597 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 CNNM1Q9NRU3 951 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 CFAP97Q9P2B7 532 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 CPA4Q9UI42 421 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 A0A088AWK7 358 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 CAPN8A6NHC0 703 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 DIRC3C9JPN6 131 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 TRIM24O15164 1050 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 EIF5BO60841 1220 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC43A1O75387 559 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 AHSGP02765 367 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 GJB1P08034 283 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 ZEB1P37275 1124 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 NOMO3P69849 1222 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 CDSNQ15517 529 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 ZNF365Q70YC5 407 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 GDF7Q7Z4P5 450 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM90A1Q86YD7 464 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 PLBD2Q8NHP8 589 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 SH3RF3Q8TEJ3 882 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 PLEKHG4BQ96PX9 1271 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 MRPL46Q9H2W6 279 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 ATP11BQ9Y2G3 1177 aa4.86□□□□□ -1.63
ECHDC1-217ENST00000488087 A0A1W2PPL8 197 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 ZNF785A8K8V0 405 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 TPP1O14773 563 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 ZNF185O15231 689 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 PRC1O43663 620 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 RPS6KA4O75676 772 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 PRSS23O95084 383 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 GNAI2P04899 355 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 CKBP12277 381 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 KCNJ5P48544 419 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 AGFG1P52594 562 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 GPSM2P81274 684 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 TOB2Q14106 344 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 PDCD4Q53EL6 469 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM102AQ5T9C2 384 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 RNF207Q6ZRF8 634 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 SRGAP1Q7Z6B7 1085 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 RHOT2Q8IXI1 618 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 PCSK9Q8NBP7 692 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC17A8Q8NDX2 589 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 OR56A1Q8NGH5 318 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 NUP133Q8WUM0 1156 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 NT5C1BQ96P26 610 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 NEU1Q99519 415 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 IMPG2Q9BZV3 1241 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 ZDHHC8Q9ULC8 765 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC45A2Q9UMX9 530 aa4.85□□□□□ -1.63
ECHDC1-217ENST00000488087 AATKQ6ZMQ8 1374 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 CFAP69A5D8W1 941 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 A6NNZ2 444 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 ADRB1P08588 477 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 RARBP10826 455 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 GCSHP23434 173 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 GNALP38405 381 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 CACNB3P54284 484 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 SOX8P57073 446 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 TBX4P57082 545 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 EXOSC9Q06265 439 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 CNN3Q15417 329 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 KIAA0753Q2KHM9 967 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 NOMO2Q5JPE7 1267 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 FOXR2Q6PJQ5 311 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 MAEAQ7L5Y9 396 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 PDSS2Q86YH6 399 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 KIAA0319LQ8IZA0 1049 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 CELF5Q8N6W0 485 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM156AQ8NDB6 213 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 TTC17Q96AE7 1141 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 MARS2Q96GW9 593 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 ZSWIM1Q9BR11 485 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 RNPEPQ9H4A4 650 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 ZMAT3Q9HA38 289 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 RSAD1Q9HA92 442 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 KLHL11Q9NVR0 708 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 RLIMQ9NVW2 624 aa4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 PIH1D1Q9NWS0 290 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-217ENST00000488087 CDYLQ9Y232 598 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms