RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 CGRRF1Q99675 332 aa24.27■■□□□ 1.48
RHBDF1-210ENST00000487201 TSG101Q99816 390 aa24.27■■□□□ 1.48
RHBDF1-210ENST00000487201 NGRNQ9NPE2 291 aaKnown RBP24.27■■□□□ 1.48
RHBDF1-210ENST00000487201 STK39Q9UEW8 545 aa24.27■■□□□ 1.48
RHBDF1-210ENST00000487201 C5orf42Q9H799 3197 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 C2orf71A6NGG8 1288 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 LRRIQ3A6PVS8 624 aaPredicted RBP24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 AARSP49588 968 aaKnown RBP eCLIP24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 STX17P56962 302 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 MCCD1P59942 119 aaPredicted RBP24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 PTPN14Q15678 1187 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 TIGD5Q53EQ6 642 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 TCEAL5Q5H9L2 206 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 KIAA0319Q5VV43 1072 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 MRPL43Q8N983 215 aaKnown RBP24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 MLKLQ8NB16 471 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 MICAL1Q8TDZ2 1067 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 FNBP1Q96RU3 617 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 NSUN3Q9H649 340 aaKnown RBP24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 IRAK3Q9Y616 596 aa24.26■■□□□ 1.47
RHBDF1-210ENST00000487201 SPTLC1O15269 473 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 PSMC2P35998 433 aaKnown RBP24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 NLRP12P59046 1061 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 LILRA4P59901 499 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 DSG1Q02413 1049 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 CCDC85BQ15834 202 aaPredicted RBP24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 KLHL40Q2TBA0 621 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 RTP2Q5QGT7 225 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 FAM171A1Q5VUB5 890 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 PDE12Q6L8Q7 609 aaKnown RBP24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 FAM186BQ8IYM0 893 aa24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 CACTINQ8WUQ7 758 aaKnown RBP24.25■■□□□ 1.47
RHBDF1-210ENST00000487201 CETN3O15182 167 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 ITGB3P05106 788 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 TNNI1P19237 187 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 GTF2F1P35269 517 aaKnown RBP eCLIP24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 SMC1AQ14683 1233 aaKnown RBP24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 DUOXA2Q1HG44 320 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 CAVIN1Q6NZI2 390 aaKnown RBP24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 MKNK1Q9BUB5 465 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 VCANP13611 3396 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 CXCL14O95715 111 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 TMEM191BP0C7N4 346 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 FGFR3P22607 806 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 POLR2BP30876 1174 aaKnown RBP24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 USP41Q3LFD5 358 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 MAFAQ8NHW3 353 aaPredicted RBP24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 TMC2Q8TDI7 906 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 SUSD3Q96L08 255 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 ITGA11Q9UKX5 1188 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 NUB1Q9Y5A7 615 aa24.24■■□□□ 1.47
RHBDF1-210ENST00000487201 TSC2P49815 1807 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 BICDL2A1A5D9 508 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 C2CD2LO14523 706 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 TKTP29401 623 aaKnown RBP24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 GLUD2P49448 558 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 HYAL1Q12794 435 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 ELAVL2Q12926 359 aaKnown RBP24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 INTS8Q75QN2 995 aaKnown RBP24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 TRAPPC11Q7Z392 1133 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 CSGALNACT2Q8N6G5 542 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 ANKRD36BP1Q96IX9 119 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 TTPALQ9BTX7 342 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 RWDD2AQ9UIY3 292 aa24.23■■□□□ 1.47
RHBDF1-210ENST00000487201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 PER2O15055 1255 aa24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 VAMP7P51809 220 aa24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 BFSP1Q12934 665 aa24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 RBM23Q86U06 439 aaKnown RBP24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 MRPL17Q9NRX2 175 aaKnown RBP24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 AGAP1Q9UPQ3 857 aa24.22■■□□□ 1.47
RHBDF1-210ENST00000487201 A0A0C4DFX4 3053 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 M0QZQ0 153 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 SLC16A3O15427 465 aaKnown RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 TRAPPC3O43617 180 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 URODP06132 367 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 CEP57Q86XR8 500 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 PPM1EQ8WY54 764 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 CST3P01034 146 aaPredicted RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 TNNC2P02585 160 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 CNPP09543 421 aaKnown RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 TRIM49P0CI25 452 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 TRIM49CP0CI26 452 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 NRIP1P48552 1158 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 COL19A1Q14993 1142 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 TDRD10Q5VZ19 366 aaKnown RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 PRSS55Q6UWB4 352 aaPredicted RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 LNX1Q8TBB1 728 aaPredicted RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 RIN2Q8WYP3 895 aaPredicted RBP24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 CEP63Q96MT8 703 aa24.21■■□□□ 1.47
RHBDF1-210ENST00000487201 PLXNA3P51805 1871 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 IKBKBO14920 756 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 EPB41P11171 864 aaKnown RBP24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 ENPEPQ07075 957 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 PPP3CAQ08209 521 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 KIAA1841Q6NSI8 718 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 C15orf39Q6ZRI6 1047 aa24.2■■□□□ 1.46
RHBDF1-210ENST00000487201 GPR65Q8IYL9 337 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms