RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MYBBP1AQ9BQG0 1328 aaKnown RBP5.47□□□□□ -1.53
GCFC2-209ENST00000486016 PHLDB1Q86UU1 1377 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 TRIM75PA6NK02 468 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 PROP1O75360 226 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 INAVAQ3KP66 663 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 SRRM1Q8IYB3 904 aaKnown RBP5.46□□□□□ -1.54
GCFC2-209ENST00000486016 COLGALT2Q8IYK4 626 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 WDR66Q8TBY9 1149 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 SLKQ9H2G2 1235 aaPredicted RBP5.46□□□□□ -1.54
GCFC2-209ENST00000486016 KLK15Q9H2R5 256 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 MANSC1Q9H8J5 431 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 KIAA1586Q9HCI6 787 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 LRIT1Q9P2V4 623 aa5.46□□□□□ -1.54
GCFC2-209ENST00000486016 MTO1Q9Y2Z2 717 aaKnown RBP5.46□□□□□ -1.54
GCFC2-209ENST00000486016 SETD1BQ9UPS6 1966 aaKnown RBP5.46□□□□□ -1.54
GCFC2-209ENST00000486016 A0A1W2PS29 197 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 PROM1O43490 865 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 SRGNP10124 158 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 FOLR3P41439 243 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 CTXN1P60606 82 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 TARDBPQ13148 414 aaKnown RBP eCLIP5.45□□□□□ -1.54
GCFC2-209ENST00000486016 RNF219Q5W0B1 726 aaPredicted RBP5.45□□□□□ -1.54
GCFC2-209ENST00000486016 VWA1Q6PCB0 445 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 TBC1D15Q8TC07 691 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 ZNF384Q8TF68 577 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 NRG4Q8WWG1 115 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 SLC17A6Q9P2U8 582 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 ARPP21Q9UBL0 812 aaPredicted RBP5.45□□□□□ -1.54
GCFC2-209ENST00000486016 DNM3Q9UQ16 869 aa5.45□□□□□ -1.54
GCFC2-209ENST00000486016 CGB1A6NKQ9 187 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 SBK3P0C264 359 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 PROK1P58294 105 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
GCFC2-209ENST00000486016 CT47A1Q5JQC4 288 aaPredicted RBP5.44□□□□□ -1.54
GCFC2-209ENST00000486016 ARHGEF25Q86VW2 580 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 TIMP4Q99727 224 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 TLR10Q9BXR5 811 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
GCFC2-209ENST00000486016 CTTNBP2NLQ9P2B4 639 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 DMTF1Q9Y222 760 aa5.44□□□□□ -1.54
GCFC2-209ENST00000486016 WIPF3A6NGB9 483 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 KIAA0391O15091 583 aaKnown RBP5.43□□□□□ -1.54
GCFC2-209ENST00000486016 HAUS5O94927 633 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 ELFN1P0C7U0 828 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 CPEP16870 476 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 GATA3P23771 443 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 KLF1Q13351 362 aaPredicted RBP5.43□□□□□ -1.54
GCFC2-209ENST00000486016 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.43□□□□□ -1.54
GCFC2-209ENST00000486016 TMPRSS9Q7Z410 1059 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 CBARPQ8N350 705 aaPredicted RBP5.43□□□□□ -1.54
GCFC2-209ENST00000486016 SH2D3CQ8N5H7 860 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 NLGN4YQ8NFZ3 816 aaPredicted RBP5.43□□□□□ -1.54
GCFC2-209ENST00000486016 IFI44Q8TCB0 444 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 TUBD1Q9UJT1 453 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
GCFC2-209ENST00000486016 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 PRAMEF33A0A0G2JMD5 474 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 PEX1O43933 1283 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 WT1P19544 449 aaPredicted RBP5.42□□□□□ -1.54
GCFC2-209ENST00000486016 FLYWCH1Q4VC44 716 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 RHOT1Q8IXI2 618 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 IL17RDQ8NFM7 739 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 SSH1Q8WYL5 1049 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 LRIG1Q96JA1 1093 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 UROC1Q96N76 676 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 DMRTA2Q96SC8 542 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 IL17RBQ9NRM6 502 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 TMA7Q9Y2S6 64 aaKnown RBP5.42□□□□□ -1.54
GCFC2-209ENST00000486016 ENTPD2Q9Y5L3 495 aa5.42□□□□□ -1.54
GCFC2-209ENST00000486016 PROB1E7EW31 1015 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 GRM6O15303 877 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 YY2O15391 372 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 MPPED1O15442 326 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 KCNA2P16389 499 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 PPM1NQ8N819 430 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 ASB6Q9NWX5 421 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 IPPQ9Y573 584 aa5.41□□□□□ -1.54
GCFC2-209ENST00000486016 SLC43A1O75387 559 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 SUN1O94901 812 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 AGFG2O95081 481 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 ITPKBP27987 946 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 MAPK10P53779 464 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 CDC42EP1Q00587 391 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 CREMQ03060 361 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 PABPC1LQ4VXU2 614 aaKnown RBP5.4□□□□□ -1.54
GCFC2-209ENST00000486016 ZNF788Q6ZQV5 615 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 LPIN2Q92539 896 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 JADE3Q92613 823 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 RAB24Q969Q5 203 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 MRGPRX4Q96LA9 322 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 KLHL32Q96NJ5 620 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 INTS13Q9NVM9 706 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 JKAMPQ9P055 326 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
GCFC2-209ENST00000486016 WASHC2AQ641Q2 1341 aa5.4□□□□□ -1.55
GCFC2-209ENST00000486016 SGTAO43765 313 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 NDUFS2O75306 463 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 MTHFD1P11586 935 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms