RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 POU5F1Q01860 360 aaKnown RBP13.56□□□□□ -0.24
PTCD1-205ENST00000485746 PSMD2Q13200 908 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 KMT5BQ4FZB7 885 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 CTXN3Q4LDR2 81 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 TMEM130Q8N3G9 435 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 ZNF507Q8TCN5 953 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 HDAC7Q8WUI4 952 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 SUSD6Q92537 303 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 CLSTN3Q9BQT9 956 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 UBE4BO95155 1302 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
PTCD1-205ENST00000485746 MYH11P35749 1972 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 TCF20Q9UGU0 1960 aaKnown RBP13.55□□□□□ -0.24
PTCD1-205ENST00000485746 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 CLIC2O15247 247 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 C1RP00736 705 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
PTCD1-205ENST00000485746 CYP2J2P51589 502 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 PPM1LQ5SGD2 360 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
PTCD1-205ENST00000485746 ZNF280DQ6N043 979 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 CRELD2Q6UXH1 353 aaPredicted RBP13.55□□□□□ -0.24
PTCD1-205ENST00000485746 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 GPR149Q86SP6 731 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 SMG7Q92540 1137 aaKnown RBP13.55□□□□□ -0.24
PTCD1-205ENST00000485746 GOLPH3LQ9H4A5 285 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 KIAA1586Q9HCI6 787 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 CD320Q9NPF0 282 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 HSPBP1Q9NZL4 362 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
PTCD1-205ENST00000485746 REV3LO60673 3130 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 ADAM12O43184 909 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 RFPL2O75678 378 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 KIF20AO95235 890 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 PAX3P23760 479 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 SNRPFP62306 86 aaKnown RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 RAB33AQ14088 237 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 SURF1Q15526 300 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 KNOP1Q1ED39 458 aaKnown RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 LILRA6Q6PI73 481 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 EPM2AIP1Q7L775 607 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 METTL23Q86XA0 190 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 BRSK2Q8IWQ3 736 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 POMKQ9H5K3 350 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
PTCD1-205ENST00000485746 TIMM13Q9Y5L4 95 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-205ENST00000485746 ATG2AQ2TAZ0 1938 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 FAM237AA0A1B0GTK4 181 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 PRRG1O14668 218 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 PPEF2O14830 753 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 KLRC4O43908 158 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 C8AP07357 584 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 KRT19P08727 400 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 ODC1P11926 461 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 ALADP13716 330 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 CPB1P15086 417 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 TAF6P49848 677 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 YWHAHQ04917 246 aaPredicted RBP13.53□□□□□ -0.24
PTCD1-205ENST00000485746 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 RNF135Q8IUD6 432 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 CSGALNACT2Q8N6G5 542 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
PTCD1-205ENST00000485746 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
PTCD1-205ENST00000485746 GOLGA5Q8TBA6 731 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
PTCD1-205ENST00000485746 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 FNBP1Q96RU3 617 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
PTCD1-205ENST00000485746 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 UNC80Q8N2C7 3258 aa13.53□□□□□ -0.24
PTCD1-205ENST00000485746 LOC730098B7Z3J9 87 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 CYB561D2O14569 222 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms