RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MIOSQ9NXC5 875 aa8.94□□□□□ -0.98
SF3A1-208ENST00000485618 DPP3Q9NY33 737 aa8.94□□□□□ -0.98
SF3A1-208ENST00000485618 ARMCX3Q9UH62 379 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-208ENST00000485618 ADAM28Q9UKQ2 775 aa8.94□□□□□ -0.98
SF3A1-208ENST00000485618 ITGA11Q9UKX5 1188 aa8.94□□□□□ -0.98
SF3A1-208ENST00000485618 DSEQ9UL01 958 aa8.94□□□□□ -0.98
SF3A1-208ENST00000485618 PRG3Q9Y2Y8 225 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-208ENST00000485618 CASTOR2A6NHX0 329 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 TMEM189-UBE2V1I3L0A0 370 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 PODXLO00592 558 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 DDHD2O94830 711 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CLSTN1O94985 981 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CXCL14O95715 111 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 URODP06132 367 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 SSTR3P32745 418 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-208ENST00000485618 VAMP7P51809 220 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 ZBTB6Q15916 424 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 STX1AQ16623 288 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 SV2CQ496J9 727 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 GLRA4Q5JXX5 417 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 ZBTB41Q5SVQ8 909 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 JADE1Q6IE81 842 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 RBM43Q6ZSC3 357 aaKnown RBP8.93□□□□□ -0.98
SF3A1-208ENST00000485618 FRMD5Q7Z6J6 570 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 PPFIBP1Q86W92 1011 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 METTL23Q86XA0 190 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CBWD2Q8IUF1 395 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 SPPL3Q8TCT6 385 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 POF1BQ8WVV4 589 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CDCA3Q99618 268 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-208ENST00000485618 IMPG2Q9BZV3 1241 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 PDE11AQ9HCR9 933 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CD320Q9NPF0 282 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 C11orf16Q9NQ32 467 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 INTS13Q9NVM9 706 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 DNAJB4Q9UDY4 337 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CTNND2Q9UQB3 1225 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CITO14578 2027 aa8.93□□□□□ -0.98
SF3A1-208ENST00000485618 CACNA1AO00555 2505 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 FNDC1Q4ZHG4 1894 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 SMTNL1A8MU46 457 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 PI4K2BG5E9Z4 385 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 H7C4K7 107 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 SYN3O14994 580 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 GPR37L1O60883 481 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 N4BP1O75113 896 aaKnown RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 KRT19P08727 400 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 IL9P15248 144 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 ATICP31939 592 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 CA8P35219 290 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 GLUD2P49448 558 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 TAF6P49848 677 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 CLCNKBP51801 687 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 AFF1P51825 1210 aaKnown RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 TPM4P67936 248 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 BIRC3Q13489 604 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 LEXMQ3ZCV2 418 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 ZCWPW2Q504Y3 356 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 C9orf57Q5W0N0 161 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 DSTYKQ6XUX3 929 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 ANKS3Q6ZW76 656 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 CREBRFQ8IUR6 639 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 GJD3Q8N144 294 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 VPS52Q8N1B4 723 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 LRRC52Q8N7C0 313 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 PARD3BQ8TEW8 1205 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 C18orf25Q96B23 403 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 ZMAT2Q96NC0 199 aaKnown RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 CGRRF1Q99675 332 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 TCF25Q9BQ70 676 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 TTPALQ9BTX7 342 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 IKZF4Q9H2S9 585 aa8.92□□□□□ -0.98
SF3A1-208ENST00000485618 NSUN3Q9H649 340 aaKnown RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 ALG13Q9NP73 1137 aaKnown RBP8.92□□□□□ -0.98
SF3A1-208ENST00000485618 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 NT5C1B-RDH14C9J2C7 533 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 HUS1O60921 280 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 AKAP3O75969 853 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 C1RP00736 705 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 SOD2P04179 222 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 ITGB1P05556 798 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 ADH1AP07327 375 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 NFICP08651 508 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 FAM163BP0C2L3 166 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 CTSAP10619 480 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 ODC1P11926 461 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 LILRA4P59901 499 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 CLDN10P78369 228 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 SPAG1Q07617 926 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 BFSP1Q12934 665 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 SGSM1Q2NKQ1 1148 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 FAM171A1Q5VUB5 890 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TCERG1LQ5VWI1 586 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 PTCRAQ6ISU1 281 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-208ENST00000485618 TTI2Q6NXR4 508 aa8.91□□□□□ -0.98
SF3A1-208ENST00000485618 FUT10Q6P4F1 479 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms