RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 LLGL2Q6P1M3 1020 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 CBWD2Q8IUF1 395 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 TMEM174Q8WUU8 243 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 PIK3R5Q8WYR1 880 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 SMARCE1Q969G3 411 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 FNIP2Q9P278 1114 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 PCDHA5Q9Y5H7 936 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 HCFC2Q9Y5Z7 792 aa28.87■■■□□ 2.21
SMDT1-203ENST00000484235 TEX28O15482 410 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 ADH1AP07327 375 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 PLA2G5P39877 138 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 CYP2J2P51589 502 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 GUCY2FP51841 1108 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 SURF1Q15526 300 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 SNRNP35Q16560 246 aaKnown RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 PUS10Q3MIT2 529 aaKnown RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 GUF1Q8N442 669 aaKnown RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 LNX1Q8TBB1 728 aaPredicted RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 SLC22A17Q8WUG5 538 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 CACTINQ8WUQ7 758 aaKnown RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 CASP10Q92851 521 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 MSLNLQ96KJ4 702 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 C11orf16Q9NQ32 467 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 DPP3Q9NY33 737 aa28.86■■■□□ 2.21
SMDT1-203ENST00000484235 BARX2Q9UMQ3 279 aaPredicted RBP28.86■■■□□ 2.21
SMDT1-203ENST00000484235 I3L4J1 428 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 TULP1O00294 542 aaPredicted RBP28.85■■■□□ 2.21
SMDT1-203ENST00000484235 PAX3P23760 479 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 WNT7BP56706 349 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 C9orf57Q5W0N0 161 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 EFCAB13Q8IY85 973 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 TMEM130Q8N3G9 435 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.85■■■□□ 2.21
SMDT1-203ENST00000484235 SUSD3Q96L08 255 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 GTPBP4Q9BZE4 634 aaKnown RBP28.85■■■□□ 2.21
SMDT1-203ENST00000484235 PDE11AQ9HCR9 933 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 MAPK8IP1Q9UQF2 711 aa28.85■■■□□ 2.21
SMDT1-203ENST00000484235 ANO9A1A5B4 782 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 PIRO00625 290 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 SYN3O14994 580 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 C1RP00736 705 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 MCM4P33991 863 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 CLCN4P51793 760 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 TFAMQ00059 246 aaKnown RBP28.84■■■□□ 2.21
SMDT1-203ENST00000484235 PRSS55Q6UWB4 352 aaPredicted RBP28.84■■■□□ 2.21
SMDT1-203ENST00000484235 SLC9A9Q8IVB4 645 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 RDH13Q8NBN7 331 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 DMAC2Q9NW81 257 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 CD207Q9UJ71 328 aa28.84■■■□□ 2.21
SMDT1-203ENST00000484235 EXOC3O60645 756 aa28.83■■■□□ 2.21
SMDT1-203ENST00000484235 HOXB8P17481 243 aaPredicted RBP28.83■■■□□ 2.21
SMDT1-203ENST00000484235 TKTP29401 623 aaKnown RBP28.83■■■□□ 2.21
SMDT1-203ENST00000484235 MYBPC2Q14324 1141 aa28.83■■■□□ 2.21
SMDT1-203ENST00000484235 PSMD5Q16401 504 aa28.83■■■□□ 2.21
SMDT1-203ENST00000484235 ZNF658Q5TYW1 1059 aaPredicted RBP28.83■■■□□ 2.21
SMDT1-203ENST00000484235 ANKRD54Q6NXT1 300 aa28.83■■■□□ 2.21
SMDT1-203ENST00000484235 ERCC4Q92889 916 aaPredicted RBP28.83■■■□□ 2.21
SMDT1-203ENST00000484235 TRAF3IP3Q9Y228 551 aa28.83■■■□□ 2.21
SMDT1-203ENST00000484235 CALUO43852 315 aaPredicted RBP28.82■■■□□ 2.2
SMDT1-203ENST00000484235 EPCAMP16422 314 aa28.82■■■□□ 2.2
SMDT1-203ENST00000484235 AARSP49588 968 aaKnown RBP eCLIP28.82■■■□□ 2.2
SMDT1-203ENST00000484235 LILRA4P59901 499 aa28.82■■■□□ 2.2
SMDT1-203ENST00000484235 PTCRAQ6ISU1 281 aaPredicted RBP28.82■■■□□ 2.2
SMDT1-203ENST00000484235 ANKS3Q6ZW76 656 aa28.82■■■□□ 2.2
SMDT1-203ENST00000484235 PDCD11Q14690 1871 aaKnown RBP28.82■■■□□ 2.2
SMDT1-203ENST00000484235 GRXCR2A6NFK2 248 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 M0QZQ0 153 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 RPL17P18621 184 aaKnown RBP28.81■■■□□ 2.2
SMDT1-203ENST00000484235 CLUL1Q15846 466 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 APPL2Q8NEU8 664 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 MFSD14AQ96MC6 490 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 GBP4Q96PP9 640 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 CLSTN3Q9BQT9 956 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 DZANK1Q9NVP4 752 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 FAM50BQ9Y247 325 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 BACE2Q9Y5Z0 518 aa28.81■■■□□ 2.2
SMDT1-203ENST00000484235 PPEF2O14830 753 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 GPR37L1O60883 481 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 NR3C1P04150 777 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 CYP24A1Q07973 514 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 PSMD6Q15008 389 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 DUOXA2Q1HG44 320 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 COBLL1Q53SF7 1204 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 SMYD4Q8IYR2 804 aaPredicted RBP28.8■■■□□ 2.2
SMDT1-203ENST00000484235 SMRP1Q8NCR6 262 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 INTS13Q9NVM9 706 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 MTRRQ9UBK8 725 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 DPP7Q9UHL4 492 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 PCDHB8Q9UN66 801 aa28.8■■■□□ 2.2
SMDT1-203ENST00000484235 PI4K2BG5E9Z4 385 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 GLUD1P00367 558 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 SMAD4Q13485 552 aaKnown RBP28.79■■■□□ 2.2
SMDT1-203ENST00000484235 NFIL3Q16649 462 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 TMEM31Q5JXX7 168 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 VARS2Q5ST30 1063 aaKnown RBP28.79■■■□□ 2.2
SMDT1-203ENST00000484235 SYCE2Q6PIF2 218 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 PALB2Q86YC2 1186 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 WDR49Q8IV35 697 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 FNBP1Q96RU3 617 aa28.79■■■□□ 2.2
SMDT1-203ENST00000484235 ITGA11Q9UKX5 1188 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms