RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ADH1AP07327 375 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 RPL13P26373 211 aaKnown RBP22.62■■□□□ 1.21
SEC13-217ENST00000482647 LTBRP36941 435 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 PRCPP42785 496 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 TFF2Q03403 129 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 CYP24A1Q07973 514 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 CAMK4Q16566 473 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 TMEM184AQ6ZMB5 413 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 TMEM130Q8N3G9 435 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 PIK3R5Q8WYR1 880 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 MFSD14AQ96MC6 490 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 FNIP2Q9P278 1114 aa22.62■■□□□ 1.21
SEC13-217ENST00000482647 ANO9A1A5B4 782 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 SYN3O14994 580 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 TEX28O15482 410 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 STIM1Q13586 685 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 KCNC3Q14003 757 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 PSMD6Q15008 389 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 NFIL3Q16649 462 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 DUOXA2Q1HG44 320 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 LLGL2Q6P1M3 1020 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 PRSS55Q6UWB4 352 aaPredicted RBP22.61■■□□□ 1.21
SEC13-217ENST00000482647 LNX1Q8TBB1 728 aaPredicted RBP22.61■■□□□ 1.21
SEC13-217ENST00000482647 CASP10Q92851 521 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 CCDC127Q96BQ5 260 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 SUSD3Q96L08 255 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 FNBP1Q96RU3 617 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 FRMD4BQ9Y2L6 1034 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 HCFC2Q9Y5Z7 792 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 TRIP11Q15643 1979 aa22.61■■□□□ 1.21
SEC13-217ENST00000482647 H3BQ06 376 aaPredicted RBP22.6■■□□□ 1.21
SEC13-217ENST00000482647 TMEM191BP0C7N4 346 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 DLATP10515 647 aaKnown RBP22.6■■□□□ 1.21
SEC13-217ENST00000482647 TKTP29401 623 aaKnown RBP22.6■■□□□ 1.21
SEC13-217ENST00000482647 LILRA4P59901 499 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 DLX2Q07687 328 aaPredicted RBP22.6■■□□□ 1.21
SEC13-217ENST00000482647 PSMD5Q16401 504 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 LEXMQ3ZCV2 418 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ISM2Q6H9L7 571 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ANKS3Q6ZW76 656 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 WDR49Q8IV35 697 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ADSSL1Q8N142 457 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 APPL2Q8NEU8 664 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 VN1R2Q8NFZ6 395 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 SLC22A17Q8WUG5 538 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ANKRD36BP1Q96IX9 119 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ASB2Q96Q27 587 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 INTS13Q9NVM9 706 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 CLEC1BQ9P126 229 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 ITGA11Q9UKX5 1188 aa22.6■■□□□ 1.21
SEC13-217ENST00000482647 M0QZQ0 153 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 PPEF2O14830 753 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 TBX10O75333 385 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 GLP2RO95838 553 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 TNNC2P02585 160 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 TNNI1P19237 187 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 NR2F2P24468 414 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 PPP1R2P41236 205 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 AARSP49588 968 aaKnown RBP eCLIP22.59■■□□□ 1.21
SEC13-217ENST00000482647 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
SEC13-217ENST00000482647 MORC3Q14149 939 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 EDRF1Q3B7T1 1238 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 CEP135Q66GS9 1140 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 DSTYKQ6XUX3 929 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 CSGALNACT2Q8N6G5 542 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 KIAA1468Q9P260 1216 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 BARX2Q9UMQ3 279 aaPredicted RBP22.59■■□□□ 1.21
SEC13-217ENST00000482647 PCDHB8Q9UN66 801 aa22.59■■□□□ 1.21
SEC13-217ENST00000482647 R3HCC1Q9Y3T6 440 aaKnown RBP22.59■■□□□ 1.21
SEC13-217ENST00000482647 C1RP00736 705 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 ITGB3P05106 788 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 RPL17P18621 184 aaKnown RBP22.58■■□□□ 1.21
SEC13-217ENST00000482647 PNPLA4P41247 253 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 CLCN4P51793 760 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 RBP5P82980 135 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 ADAM9Q13443 819 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 PUS10Q3MIT2 529 aaKnown RBP22.58■■□□□ 1.21
SEC13-217ENST00000482647 ZCWPW2Q504Y3 356 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 CENPPQ6IPU0 288 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 C1orf127Q8N9H9 656 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 DHTKD1Q96HY7 919 aaPredicted RBP22.58■■□□□ 1.21
SEC13-217ENST00000482647 TSG101Q99816 390 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 MTMR12Q9C0I1 747 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 CLSTN2Q9H4D0 955 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 CD207Q9UJ71 328 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 AGAP1Q9UPQ3 857 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 BACE2Q9Y5Z0 518 aa22.58■■□□□ 1.21
SEC13-217ENST00000482647 ARHGEF37A1IGU5 675 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 H7C4K7 107 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 BIN1O00499 593 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 PSMA7O14818 248 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 EPCAMP16422 314 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 HOXB8P17481 243 aaPredicted RBP22.57■■□□□ 1.2
SEC13-217ENST00000482647 POLR2BP30876 1174 aaKnown RBP22.57■■□□□ 1.2
SEC13-217ENST00000482647 TAF6P49848 677 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 VARS2Q5ST30 1063 aaKnown RBP22.57■■□□□ 1.2
SEC13-217ENST00000482647 LMBRD2Q68DH5 695 aaPredicted RBP22.57■■□□□ 1.2
SEC13-217ENST00000482647 ANKRD54Q6NXT1 300 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 ELMSAN1Q6PJG2 1045 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 PALB2Q86YC2 1186 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms