RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 OSBPL6Q9BZF3 934 aa11.33□□□□□ -0.6
DDX39B-220ENST00000482195 CCDC113Q9H0I3 377 aa11.33□□□□□ -0.6
DDX39B-220ENST00000482195 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
DDX39B-220ENST00000482195 ZSCAN32Q9NX65 697 aa11.33□□□□□ -0.6
DDX39B-220ENST00000482195 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.6
DDX39B-220ENST00000482195 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
DDX39B-220ENST00000482195 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
DDX39B-220ENST00000482195 COL4A2P08572 1712 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 JAK2O60674 1132 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 ECI2O75521 394 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 HARSP12081 509 aaKnown RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 ROR1Q01973 937 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 LPAL2Q16609 132 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 ELMOD1Q8N336 334 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 NSUN7Q8NE18 718 aaKnown RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 PPP1R10Q96QC0 940 aaKnown RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-220ENST00000482195 PLA2G2FQ9BZM2 168 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 CYP4F11Q9HBI6 524 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 DLL3Q9NYJ7 618 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 GDE1Q9NZC3 331 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 RAB23Q9ULC3 237 aa11.32□□□□□ -0.6
DDX39B-220ENST00000482195 ACACBO00763 2458 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 CCDC169A6NNP5 214 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 PODXLO00592 558 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 PTPN2P17706 415 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 CYP11B2P19099 503 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 EFNA5P52803 228 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 MTAPQ13126 283 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF174Q15697 407 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 ME3Q16798 604 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 UPP1Q16831 310 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 TANGO2Q6ICL3 276 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 PRR23BQ6ZRT6 265 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 CEP120Q8N960 986 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 TCEAL4Q96EI5 215 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-220ENST00000482195 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
DDX39B-220ENST00000482195 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 H7C4K7 107 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SDHBP21912 280 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 RPA1P27694 616 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 MCM4P33991 863 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 RPS9P46781 194 aaKnown RBP11.3□□□□□ -0.6
DDX39B-220ENST00000482195 USP46P62068 366 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 LMNB2Q03252 620 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
DDX39B-220ENST00000482195 ADCY1Q08828 1119 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
DDX39B-220ENST00000482195 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 NELL2Q99435 816 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 CNTNAP3Q9BZ76 1288 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 BHMT2Q9H2M3 363 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SLITRK6Q9H5Y7 841 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 ZFP14Q9HCL3 533 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 SLC38A7Q9NVC3 462 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 INSL5Q9Y5Q6 135 aa11.3□□□□□ -0.6
DDX39B-220ENST00000482195 ANK1P16157 1881 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ARHGEF37A1IGU5 675 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 PRR5-ARHGAP8B1AHC4 643 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 K7ERI5 159 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF197O14709 1029 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 MYL4P12829 197 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CPB1P15086 417 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 FCARP24071 287 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 GDI1P31150 447 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 GRM5P41594 1212 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms