RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 GNA15P30679 374 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 SP4Q02446 784 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
C9orf3-218ENST00000482056 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-218ENST00000482056 MTERF2Q49AM1 385 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.2
C9orf3-218ENST00000482056 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-218ENST00000482056 ABRAQ8N0Z2 381 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 JPH2Q9BR39 696 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-218ENST00000482056 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 C11orf70Q9BRQ4 267 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 HAUS2Q9NVX0 235 aa16.33■□□□□ 0.2
C9orf3-218ENST00000482056 TMEM120BA0PK00 339 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 TP73O15350 636 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
C9orf3-218ENST00000482056 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-218ENST00000482056 KYNUQ16719 465 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 DCAF15Q66K64 600 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 LMBRD2Q68DH5 695 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-218ENST00000482056 ABHD15Q6UXT9 468 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 PHLDB2Q86SQ0 1253 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 CCDC60Q8IWA6 550 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-218ENST00000482056 DEPTORQ8TB45 409 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 KCNN1Q92952 543 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 MAF1Q9H063 256 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 PARVAQ9NVD7 372 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-218ENST00000482056 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
C9orf3-218ENST00000482056 PIGRP01833 764 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 BACE1P56817 501 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NLRP11P59045 1033 aaKnown RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NOMO3P69849 1222 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 STAT4Q14765 748 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 TMEM270Q6UE05 265 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NINJ2Q9NZG7 142 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 IP6K2Q9UHH9 426 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 LGALS13Q9UHV8 139 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 GSTTP1A0A1W2PQM5 241 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 K7ERI5 159 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NDC80O14777 642 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 CDH16O75309 829 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 SUN1O94901 812 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 DPEP1P16444 411 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NAMPTP43490 491 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 MAMLD1Q13495 774 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 SPRED3Q2MJR0 410 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 PLEKHA7Q6IQ23 1121 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 RELL1Q8IUW5 271 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 RIBC1Q8N443 379 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 RBBP8NLQ8NC74 664 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 MGARPQ8TDB4 240 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 RBM41Q96IZ5 413 aaKnown RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 CGRRF1Q99675 332 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 MSTO1Q9BUK6 570 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
C9orf3-218ENST00000482056 R3HDM2Q9Y2K5 976 aaKnown RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 USP15Q9Y4E8 981 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-218ENST00000482056 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-218ENST00000482056 PHIPQ8WWQ0 1821 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
C9orf3-218ENST00000482056 SNX3O60493 162 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 CLTAP09496 248 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 ACOT2P49753 483 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 VPS41P49754 854 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-218ENST00000482056 SPOPLQ6IQ16 392 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 ARHGEF18Q6ZSZ5 1173 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 GBP7Q8N8V2 638 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-218ENST00000482056 ACAD9Q9H845 621 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 PICK1Q9NRD5 415 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 SLC12A4Q9UP95 1085 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
C9orf3-218ENST00000482056 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 ACTL7BQ9Y614 415 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 DOCK5Q9H7D0 1870 aa16.3■□□□□ 0.2
C9orf3-218ENST00000482056 LRRIQ4A6NIV6 560 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 TCP11X1B4DZS4 312 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 VNN1O95497 513 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 BRAFP15056 766 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
C9orf3-218ENST00000482056 DSG3P32926 999 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms