RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 EIF1ADQ8N9N8 165 aaKnown RBP16.88■□□□□ 0.29
RXRA-202ENST00000481739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.88■□□□□ 0.297e-7■■■■■ 64.4
RXRA-202ENST00000481739 ARHGEF26Q96DR7 871 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 MS4A14Q96JA4 679 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 PCDHB18PQ96TA0 734 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 LRRC1Q9BTT6 524 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 UBXN6Q9BZV1 441 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
RXRA-202ENST00000481739 PTPRHQ9HD43 1115 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
RXRA-202ENST00000481739 CPSF3Q9UKF6 684 aaKnown RBP16.88■□□□□ 0.29
RXRA-202ENST00000481739 TNFSF13BQ9Y275 285 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 NRCAMQ92823 1304 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 TULP1O00294 542 aaPredicted RBP16.87■□□□□ 0.29
RXRA-202ENST00000481739 CEP104O60308 925 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 CLSTN1O94985 981 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 MMEP08473 750 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 CLTAP09496 248 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 PLA2G4AP47712 749 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 NOP14P78316 857 aaKnown RBP16.87■□□□□ 0.29
RXRA-202ENST00000481739 GABPB1Q06547 395 aaPredicted RBP16.87■□□□□ 0.29
RXRA-202ENST00000481739 NCOA4Q13772 614 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 DUOXA2Q1HG44 320 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 ATF7IP2Q5U623 682 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 TAF3Q5VWG9 929 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 IFT20Q8IY31 132 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 FAXDC2Q96IV6 333 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 MTG1Q9BT17 334 aaPredicted RBP16.87■□□□□ 0.29
RXRA-202ENST00000481739 PI4K2AQ9BTU6 479 aa16.87■□□□□ 0.29
RXRA-202ENST00000481739 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 IL18RAPO95256 599 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 INHAP05111 366 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 DNA2P51530 1060 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 CASP8Q14790 479 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 DNAAF5Q86Y56 855 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 UBL4BQ8N7F7 174 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 LINC01465Q8N7H1 131 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 AVENQ9NQS1 362 aaPredicted RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 PTCH2Q9Y6C5 1203 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 PTPRJQ12913 1337 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 HAS3O00219 553 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 B4GALT4O60513 344 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 VTNP04004 478 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 GRK4P32298 578 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 WNT7BP56706 349 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 MBTD1Q05BQ5 628 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 ZNF568Q3ZCX4 644 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 ZBTB41Q5SVQ8 909 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 EMBQ6PCB8 327 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 SCLT1Q96NL6 688 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 FAM49AQ9H0Q0 323 aaPredicted RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 DDX20Q9UHI6 824 aaKnown RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 COG5Q9UP83 839 aa16.86■□□□□ 0.29
RXRA-202ENST00000481739 NOC2LQ9Y3T9 749 aaKnown RBP16.86■□□□□ 0.29
RXRA-202ENST00000481739 C17orf102A2RUQ5 167 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
RXRA-202ENST00000481739 ACO1P21399 889 aaKnown RBP16.85■□□□□ 0.29
RXRA-202ENST00000481739 EPHB4P54760 987 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 NNTQ13423 1086 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 SMC1AQ14683 1233 aaKnown RBP16.85■□□□□ 0.29
RXRA-202ENST00000481739 SGSM1Q2NKQ1 1148 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 ZNF653Q96CK0 615 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 WNT8AQ9H1J5 351 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 GOLPH3Q9H4A6 298 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 SLITRK6Q9H5Y7 841 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 ALG6Q9Y672 507 aa16.85■□□□□ 0.29
RXRA-202ENST00000481739 DDX3YO15523 660 aaKnown RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 CYP2C9P11712 490 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 UNGP13051 313 aaPredicted RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 YWHAEP62258 255 aaKnown RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 CDC42EP1Q00587 391 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 ZBTB33Q86T24 672 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 ZNF564Q8TBZ8 553 aaPredicted RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 AENQ8WTP8 325 aaKnown RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 VCPIP1Q96JH7 1222 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 HMX1Q9NP08 348 aaPredicted RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.84■□□□□ 0.294e-7■■■■■ 259.9
RXRA-202ENST00000481739 DMGDHQ9UI17 866 aaKnown RBP16.84■□□□□ 0.29
RXRA-202ENST00000481739 A0A087WZ62 844 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 GOLGA6L10A0A0M3HER8 536 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 CCDC66A2RUB6 948 aa16.84■□□□□ 0.29
RXRA-202ENST00000481739 TNNC2P02585 160 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms